| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 157 [0] | [0] 159 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 151 (1.350) | 72/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 160 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738963‑739010 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 2:3810364/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 2:4282680/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:1662813/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 2:4275692/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 2:310861/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 2:1025504/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:559659/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:181344/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 2:2089319/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 2:3500773/1‑50 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 1:1336444/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 2:4165396/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 2:1016983/1‑49 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:2392727/1‑49 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 2:889419/1‑49 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 2:2414379/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 2:4469040/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:2589526/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 2:937203/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1391020/1‑49 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 2:478033/1‑49 AACTGGTGATTTTTATTGATTGATGAGTTTTGAATACATTGAACGTCTA > 2:4486064/1‑49 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 2:2696909/1‑50 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC > 2:331811/1‑50 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 2:392275/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAGCGTCTACACT < 1:525122/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:224969/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 2:3716240/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 2:3682915/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:1131448/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:1222664/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 2:3897719/48‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAATTA < 2:838755/50‑1 GTGATTTTTATTGATTGCTGAGGTTTGAATACATGGAACGTCTACACT < 1:4422896/48‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 2:1815735/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 2:3353109/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC < 1:318643/50‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT < 1:337424/49‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 2:3174710/50‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC > 2:2982233/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 2:2025589/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:2634767/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 2:2476659/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 2:2140196/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:4466083/49‑1 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 2:463827/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT > 2:2518368/1‑49 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:5008/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 2:3587818/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 2:2871268/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:1140716/49‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:75339/1‑50 GATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC > 2:364196/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 2:3395875/49‑1 TTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGC < 1:3189485/50‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 2:2009490/1‑49 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 2:2734681/50‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 2:3171754/1‑48 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 2:3393953/1‑50 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:962189/1‑49 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:1710747/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 2:378534/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:304954/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 2:1504632/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:376231/48‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:2051867/1‑48 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 2:1531681/1‑48 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 2:1382583/50‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG < 2:1631442/50‑1 TTTTGCATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 2:2547122/1‑49 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGC < 1:937730/50‑1 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:3988308/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:4236165/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 1:2871056/49‑1 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 2:3097222/49‑1 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 2:4095739/49‑1 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:3486455/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 2:4540493/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:644387/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 2:4143799/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 2:3926927/49‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:2862107/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 2:2858573/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 1:3597290/50‑1 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:4409540/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 2:3416621/1‑50 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 2:2643892/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:73069/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 2:3592736/1‑50 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 1:4442779/50‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 2:245498/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 2:3566238/1‑50 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:2046368/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 1:1451139/1‑50 GAACGTCTACACTTACTCCTGTAACCCGCTCAGGAGCAGTAATGAATCTA > 1:3386529/1‑50 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 1:2245731/49‑1 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 2:1578967/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC < 1:363166/50‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:1533462/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > 2:3202839/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738963‑739010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |