| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 145 [0] | [0] 143 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 143 (1.230) | 75/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 143 total aligned reads displayed.
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:3564781/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:802150/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:3160253/1‑50 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:1564506/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:163974/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 2:902217/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 2:2330418/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:2160302/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 2:882869/1‑50 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 2:2763250/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:1903216/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 2:600156/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 2:1757248/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA < 1:1809298/50‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 2:817050/1‑49 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:1086352/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 2:3847572/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:3585080/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 2:4055428/50‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:3926733/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:3517603/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 2:2413357/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:1387370/1‑49 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:2888058/50‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 2:3253705/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:2126461/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 2:2110482/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:810424/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC < 2:81227/49‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:3792775/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:3147663/1‑49 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:715292/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:1822747/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:2966022/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:3077520/1‑50 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:3638541/1‑49 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:1557078/1‑49 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 2:2782555/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 2:4105788/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 1:17013/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 2:3339992/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT < 1:2845239/49‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:1921621/1‑49 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:2653457/1‑49 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:2060467/1‑49 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 2:277976/50‑1 GCAACGGCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 1:3161637/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:3883855/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:2242095/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATC < 1:2249190/50‑1 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:578246/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 2:2581428/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:75522/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 2:2990502/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:2134609/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:3999660/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 2:378605/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT > 2:1888907/1‑50 CCAATGGCCTGGTTTATTGACCGAATGCGGACCACATTCACATTATTTCT > 1:534486/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 2:2968197/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:2716515/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:31381/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 2:2163456/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:2935290/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 2:142122/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:4353169/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:3403536/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:1384700/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:3087726/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:707633/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 2:3849122/1‑50 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:992171/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG > 1:3682394/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 2:2074719/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG > 2:2177408/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG > 1:1140900/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 2:2996133/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:853423/1‑50 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:975793/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:1854388/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG < 1:4426274/50‑1 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTGACGCGCG > 1:1233033/1‑50 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:2941730/1‑49 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 2:3401120/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA < 2:4498161/49‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:448501/48‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:1565059/48‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT > 2:1521454/1‑50 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:3254728/50‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 2:3294662/50‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:3461914/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 2:3362726/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 2:4548469/50‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 2:360263/49‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 1:3890215/49‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3071066/1‑48 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG < 2:2585375/50‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 2:4535355/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 2:141586/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:2339767/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |