| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,286,401 | Δ3,780 bp | [yejO]–[yejO] | [yejO], insH‑8, [yejO] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2286401 | 2290180 | 3780 | 199 [0] | [0] 198 | [yejO]–[yejO] | [yejO],insH‑8,[yejO] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2286400 | 0 (0.000) | 194 (1.660) | 80/98 | 0.0 | 100% | pseudogene (2515/2525 nt) | yejO | adhesin‑like autotransporter YejO |
| ? | NC_000913 | 2290181 = | 0 (0.000) | intergenic (‑1/‑319) | yejO/narP | adhesin‑like autotransporter YejO/DNA‑binding transcriptional dual regulator NarP | |||||
Only 100 of 194 total aligned reads displayed.
CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 CAGACCGTGACACATCGCAGCCTGTTTATTTTCTGTTATCAGAACGTCCT < 1:3619629/50‑1CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT < 2:2820856/50‑1CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT < 2:2916024/50‑1CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 2:4455212/1‑50CAGACCGAGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:1515372/1‑50 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:2646226/1‑49 AGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 1:201623/1‑49 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGA < 2:2514475/50‑1 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 2:194883/1‑48 GACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCT > 2:3430832/1‑48 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 2:4119435/50‑1 ACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAG < 1:1287901/50‑1 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC > 2:129174/1‑50 CCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGC < 2:1668578/50‑1 CGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCT < 2:331333/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 2:322537/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 1:482513/50‑1 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT > 2:3316881/1‑50 GTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTT < 2:3808655/50‑1 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:4060736/1‑50 TGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT < 2:1492021/50‑1 TGACACATCACAGCCTATTTATTTTCTCTTATCAGAACGTCCTGAGCTTT < 2:731825/50‑1 GACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTT > 1:1856327/1‑49 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA > 2:2770139/1‑50 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:811373/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCA < 1:58745/50‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 2:4539679/49‑1 ACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTC < 1:673641/49‑1 CACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 1:388643/50‑1 CACATCACAGCCTGGTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCAT < 2:1543848/50‑1 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC > 2:3004298/1‑50 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:4531871/50‑1 ACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATC < 1:1885311/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:798223/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:1025536/50‑1 CATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC < 1:1121456/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCT < 1:3972018/50‑1 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 1:2764278/1‑49 ATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCC > 2:1425960/1‑49 CACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT > 2:1383085/1‑50 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 2:1133596/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG < 2:3718760/50‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 2:2542475/49‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:3011891/49‑1 ACAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTAT < 1:4336920/49‑1 CAGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATG > 1:4198320/1‑49 AGCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGA > 1:2622275/1‑49 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 1:4460049/50‑1 GCCTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAA < 2:2825671/50‑1 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:1388995/1‑49 CTGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAAT > 1:2237308/1‑49 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 1:3846532/1‑49 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 2:3382719/1‑49 TGTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATT > 2:637744/1‑49 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 2:3220253/1‑50 GTTTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAA > 2:2069984/1‑50 TTATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATT > 1:1056149/1‑50 TATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTG > 1:2536283/1‑50 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGC > 1:4074708/1‑50 ATTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTG < 2:4048781/49‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT > 2:4229830/1‑50 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT < 1:2396093/50‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCT < 1:3159298/50‑1 TTTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGC < 1:16163/49‑1 TTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG > 1:3425400/1‑50 TTTCTGTTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTG > 1:2154191/1‑50 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 2:4306740/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 2:2289928/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAA < 1:932522/50‑1 TTATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTA < 1:2156720/47‑1 TATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 2:3853001/1‑50 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 1:1669463/49‑1 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 2:1866656/1‑49 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG < 2:1778200/49‑1 ATCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAG > 1:2582537/1‑49 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCA > 1:3611757/1‑50 TCAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGC < 1:2312471/49‑1 CAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT > 1:1766082/1‑50 CAGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCAT > 2:3618069/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 1:4152176/1‑50 AGAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATT > 2:2697157/1‑50 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG < 2:1175142/50‑1 GAACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTG > 2:2376887/1‑50 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:611725/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:2806368/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG < 1:3297319/50‑1 AACGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGG > 1:1350752/1‑50 ACGTCATGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 2:4497830/1‑50 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:1787/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGT < 1:3590245/50‑1 CGTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGG > 2:3046871/1‑49 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:4097619/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 2:1229215/1‑50 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA < 2:2186962/50‑1 GTCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 2:294172/1‑50 TCCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 2:2583885/1‑49 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 2:1375926/1‑48 CCTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:1958025/1‑48 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACA < 1:3260985/49‑1 CTGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTA > 1:155720/1‑47 CAGACCGTGACACATCACAGCCTGTTTATTTTCTGTTATCAGAACGTCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2286352‑2286400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGAGCTTTCATCCTATGAAATTAATTGCTGTTAAAAGCATTGGGTACAG > NC_000913/2290181‑2290229 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |