| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 180 [0] | [0] 175 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 174 (1.490) | 76/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 174 total aligned reads displayed.
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 2:501829/50‑1TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:1922204/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 2:2988542/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 2:2947035/1‑48 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:1184918/1‑48 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTA > 1:2026215/1‑48 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 2:2601691/1‑49 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 2:4019226/1‑49 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 2:568046/1‑49 AAAAGTGGATAAAATAATTTTACCGACCGGATTTTTGTCCTAGAGCCAT < 2:888637/49‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1950414/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3040815/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3683915/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 2:2558720/49‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACA < 2:2593793/50‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 2:3471435/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 2:1995026/1‑48 GTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGC < 2:3293481/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 2:3508328/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:2343663/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:3076483/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC < 1:2895618/50‑1 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:4131416/1‑50 GGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:2874019/1‑50 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:3484705/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:3697600/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 2:1189601/49‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:74756/49‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 2:3611794/1‑49 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 2:4245100/1‑49 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 2:3772459/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCAC < 2:276979/50‑1 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:1066365/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:3796659/1‑49 TAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 2:1423687/1‑49 AAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACA > 2:1244900/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:1050601/50‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 2:3129348/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:542089/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:3956601/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 2:346519/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 2:726412/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1323732/1‑50 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:384503/1‑49 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 2:1110773/1‑49 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 2:1349317/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT < 1:927814/50‑1 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:4109850/1‑49 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:1019910/1‑48 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3136925/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 2:4474271/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAG > 1:2240111/1‑50 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:2449251/49‑1 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 2:1594566/49‑1 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:1631471/1‑50 TACCCACCGGATTTTTACCCTAGACCCATACAGCCTCACACTCGATGAGG > 2:2682862/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATTCAGCCTCACACTCGATGAGG < 2:205983/49‑1 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:2807699/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:1832382/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG < 2:1862010/49‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC > 1:2222885/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC < 2:1292675/49‑1 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 2:2632092/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG > 1:3627375/1‑50 CACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTG < 2:2855471/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:1096013/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 2:2696697/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 2:643494/1‑49 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 1:1426363/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 2:1332842/50‑1 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1565747/1‑48 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:2679864/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG < 2:13873/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 2:113624/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 2:2779658/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:2857929/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:2146204/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 2:3059741/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 2:1803911/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 2:2327652/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 2:3874819/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 2:1559825/1‑50 TTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC < 2:2159952/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT < 1:2616319/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT < 2:3727640/49‑1 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 2:4489905/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:4244859/1‑49 TACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTT > 1:1528146/1‑49 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 2:971957/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 2:335885/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 2:106864/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:71570/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:669299/50‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA < 1:650957/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 2:4081942/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 2:3692026/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:4481146/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:4376142/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:3874745/1‑49 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 2:776296/1‑49 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |