| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 120 [0] | [0] 117 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 116 (0.990) | 57/98 | 0.1 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
Only 100 of 116 total aligned reads displayed.
TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAC < 1:578193/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 2:1377959/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 2:3550441/49‑1 GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACA < 2:4148543/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 2:629358/50‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGG < 1:1461907/50‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 2:4514095/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 2:4361134/49‑1 CAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAG < 2:41950/49‑1 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 2:672669/1‑50 AAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGC > 1:4313358/1‑50 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG < 1:2270411/50‑1 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG > 1:1129693/1‑50 AGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCG > 1:2722976/1‑50 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG < 2:2138239/50‑1 GCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 2:2762564/1‑50 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGC < 2:707175/50‑1 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:384974/1‑49 CTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGG > 1:3245521/1‑49 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 1:2571859/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA > 2:25960/1‑50 TGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGCCGGCA > 1:2711547/1‑50 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAGCTCAGGCGGCA < 2:3467512/48‑1 GGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCA < 1:2171821/48‑1 GCAAACTAAGTATCTGACCCCGCCTACGGAATAGAACACAGGCGGCACT > 2:524556/1‑49 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACATGCGGCACTA < 2:1133609/50‑1 GCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTA < 2:3116865/50‑1 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 1:3522386/1‑50 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA > 1:3695667/1‑50 CAAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAA < 2:1552805/50‑1 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC > 2:2729140/1‑50 AAACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAAC > 2:283489/1‑50 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 2:2420251/50‑1 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 1:340512/50‑1 AACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACC < 2:1643765/50‑1 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 1:1074693/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 2:4370099/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC > 1:2372528/1‑50 ACTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCC < 2:489427/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 2:1620526/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:1102354/1‑50 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 2:786132/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:1402010/1‑50 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG < 1:333591/50‑1 CTAAGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCG > 1:3801500/1‑50 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:1255769/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:2419175/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGAC < 1:1876091/50‑1 AGTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGG < 1:1441232/48‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:3573416/50‑1 GTATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG < 1:1109069/50‑1 TATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGT < 1:2501991/50‑1 ATCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACG > 2:2144989/1‑48 TCTGAGCCGGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 2:2414054/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 2:1508262/49‑1 TCTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTA < 2:3989066/49‑1 CTGACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA > 2:1771215/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 2:1510497/1‑50 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG < 2:4200355/50‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG < 1:1275280/50‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 2:2470341/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACT < 2:3488638/49‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA < 1:2869088/47‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA < 2:2427419/47‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA < 2:604513/47‑1 ACCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGA < 1:2106471/47‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 2:1006617/50‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 2:1029513/50‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGT < 1:4221497/50‑1 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:2412764/1‑49 CCCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTG > 1:189439/1‑49 CCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGATTGTA < 1:4297735/50‑1 CCCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTA > 1:4033101/1‑50 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 1:2902919/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 1:399679/50‑1 CCGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT < 2:2294762/50‑1 CGCATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTAT > 1:883463/1‑49 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA < 2:2888983/50‑1 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACA < 1:691806/50‑1 ATAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTAC > 2:3776561/1‑49 TAAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA < 2:4242547/50‑1 AAGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 2:4459214/1‑49 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAA < 1:707881/50‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAA < 1:3324724/49‑1 AGGAATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAA > 2:2184473/1‑48 AATAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCG > 2:2401932/1‑50 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC < 1:2317541/50‑1 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGC < 1:4045172/50‑1 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 1:2890550/1‑49 TAGAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGG > 2:4174285/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAA < 2:2075839/50‑1 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA > 1:4448188/1‑49 GAACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCA > 2:2613297/1‑49 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 2:313218/50‑1 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 2:1710327/50‑1 ACACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAA < 1:426007/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 2:1298986/50‑1 CACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAA < 1:1367511/50‑1 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG < 2:4155464/50‑1 ACAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG < 2:816458/50‑1 TGCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2509583‑2509630‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517950‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |