| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 257 [0] | [1] 261 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 245 (2.190) | 81/94 | 0.0 | 99.8% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 1 (0.010) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 261 total aligned reads displayed.
GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:862032/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCCGATCTTTATAGCCCA > 1:3806809/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 2:3962825/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:4523649/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 1:432650/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 2:47863/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTGCAGATCTTTATAGCCCA < 1:3164177/48‑1 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 2:2779684/1‑49 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 2:352457/1‑49 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:3569251/1‑49 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 2:3086028/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA > 1:1730360/1‑50 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 2:1197447/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTGCAGATCTTTATAGCCCACTT < 2:1889626/49‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 2:4440779/1‑50 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:3410282/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 1:2406742/1‑50 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 2:450490/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 2:3196879/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 2:3137135/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:1798111/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:4150727/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 2:1101756/50‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 2:3870118/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:3008556/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 2:894580/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:1613176/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:3981805/1‑50 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:681492/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 2:645546/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTCATAGCCCACTTATTTAA > 2:2767829/1‑50 TTACACTCCGCTATATCTTTCTTCAGATCTTTATAGCCCACTTATTTAgc < 2:3423724/50‑3 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC < 1:2052954/50‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 2:4352764/1‑49 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:1622743/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 2:2510192/50‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT > 2:832697/1‑50 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT > 2:3324533/1‑50 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:3263024/50‑1 CCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG > 1:2160642/1‑49 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAGCTTGA < 2:992944/49‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 2:3291034/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:2928176/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:1488928/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA < 1:793364/49‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 2:3678400/48‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 2:4254999/48‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:3601872/50‑1 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 1:1348686/50‑1 ATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 2:3773436/1‑49 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT > 1:532396/1‑48 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 2:1474980/1‑50 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 1:2256021/1‑50 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 2:1045636/1‑50 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG < 2:198034/49‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG < 2:4545764/49‑1 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG < 2:2630819/49‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT < 2:4381618/50‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 2:2366742/1‑50 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 2:585757/1‑50 CTTTCATCAGATCCTTATAGCCCACGTATTTAACAACTTGAAAATAAGGT < 2:749892/50‑1 TTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT > 2:2280664/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 2:3030913/1‑50 TTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:2238125/1‑49 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC > 2:1012886/1‑50 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:3337793/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC < 1:1068435/50‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC < 1:3732115/50‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:1173147/49‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT > 1:14556/1‑50 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 2:3888187/50‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 2:4286937/50‑1 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 2:2910170/1‑50 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 2:2260263/1‑50 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 2:1714183/1‑50 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG > 2:553882/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:2882981/1‑50 TATAGCCGACTTATTTAACAACTTGAAAATAAGGTCTTT < 2:2168212/39‑1 TATAGCCCACTTATTTAACAACTTGAGAATAAGGTGTTTTACCTGGGCTG > 1:1016681/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT < 2:2473207/48‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG < 2:677540/47‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG < 1:1925240/47‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG < 1:2450657/47‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:3650294/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:2826321/40‑1 TAGCTCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 2:3375978/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:2680240/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT < 2:3402921/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:4348692/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:555072/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT < 1:770786/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 2:1431039/1‑49 AGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 2:2063035/1‑50 AGCCCACTTATTTAACAACTTGAAAATAAGGCGTTTTACCTGGGTTGTTA > 1:2014648/1‑50 GCCCGCTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 1:921530/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 2:1792106/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 2:1872001/49‑1 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA < 2:4073564/50‑1 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA < 1:1231146/50‑1 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA > 2:3598243/1‑49 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |