| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 103 [0] | [0] 105 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 103 (0.880) | 58/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
Only 100 of 103 total aligned reads displayed.
CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA > NC_000913/3091055‑3091102 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC < 2:3902350/50‑1 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC < 2:348122/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 2:2935998/1‑49 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 1:2448188/50‑1 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 1:4155597/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 2:1927830/1‑49 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:2422594/1‑49 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 1:3569221/1‑50 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 2:2439245/1‑50 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 2:1492102/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 2:644009/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC < 2:4492946/50‑1 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC < 1:3214995/50‑1 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:1897/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC < 2:2734223/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 1:1965851/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 2:4034462/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 1:4189725/50‑1 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 1:2553955/50‑1 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 2:3983319/1‑48 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG > 1:2340652/1‑50 TTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG > 1:3911150/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:3610553/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:3999867/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGAGCCTACACTAGCGG > 1:1559192/1‑49 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:1180895/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:1657940/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:4164229/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGG < 1:2285237/49‑1 GCTACGTTGCCGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 2:4483216/1‑50 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT < 1:2520275/50‑1 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 2:3973808/1‑50 ACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC > 2:1447460/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT < 2:1307332/50‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT > 1:4469206/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT > 1:2154744/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC < 2:3538856/49‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:4277220/48‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:383334/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 2:3379173/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:2605704/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 2:425257/50‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT > 1:3362479/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 2:1431663/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:2129434/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:813068/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCGTTT < 2:688670/49‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG < 2:2870325/50‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT < 1:2910894/49‑1 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:2591762/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:828896/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:4162708/1‑50 GGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:1169759/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 2:2363083/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:1182492/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:4143074/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:4323380/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 2:3868375/49‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 2:623690/1‑49 CGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC > 1:2922300/1‑50 CGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC > 2:3943349/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCa < 2:4213602/50‑2 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:3128499/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:1148559/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 2:1098212/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC < 1:159920/49‑1 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC < 1:405314/50‑1 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:2861200/1‑50 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:4148242/1‑49 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:2151165/1‑49 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:3702093/1‑49 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCT < 1:4026803/49‑1 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCT < 2:225040/49‑1 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC > 2:1430960/1‑50 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC > 1:4151199/1‑50 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA < 1:1956378/49‑1 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC < 2:337420/49‑1 AACACGGAG‑AAGCGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC > 2:233466/1‑50 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 1:3136347/1‑50 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC < 2:4085741/50‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 1:931830/1‑50 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 2:109994/49‑1 CACGGAG‑AAGTGCCTACGCTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 2:1434846/50‑1 CACGGAG‑AAGTGCCTACGCTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 2:150642/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 2:4236771/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 2:737149/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 2:3002847/1‑49 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG < 1:3307845/48‑1 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 2:1577143/3‑50 agAAGTGCCCACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 1:3497120/3‑50 gAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCCCGCG > 1:4136239/2‑49 gAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 1:4560714/2‑49 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:2300286/50‑1 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:2289436/50‑1 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 2:3819361/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:3856049/1‑50 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC < 1:3408054/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGATAACCCCTACCCCACGAGTAC < 2:4019054/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 2:2429324/50‑1 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA < 1:2931576/50‑1 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA > NC_000913/3091055‑3091102 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |