| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 227 [0] | [0] 224 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 222 (1.900) | 78/98 | 0.0 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
Only 100 of 222 total aligned reads displayed.
TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:3325312/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACT > 1:3569903/1‑50 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAAC < 2:3560511/49‑1 TATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAA < 1:4516641/48‑1 TATTTCTGC‑GCATTCCCAACCTCCTGTGTTGATGTCCAGCGAGTATA < 2:2978560/47‑1 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 2:1340225/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 2:2679007/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 2:4391736/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 1:1295166/1‑50 ATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT > 2:1586483/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:1800393/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT < 2:2286855/50‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 2:527709/1‑50 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 2:2597825/49‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTT < 2:3445738/49‑1 TTTCTGC‑GCATTCCCAGCCTCCTGTGCTGATTTCCAACGAGTATAACTTT > 2:1174440/1‑50 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 2:4124126/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:902107/1‑49 TTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTT > 1:253908/1‑49 gcGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 2:3199757/3‑49 gcGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT > 1:56716/3‑49 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA < 2:210695/49‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:1337518/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTT < 1:3680268/48‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:2553385/47‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATT < 1:2944563/47‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:2386123/46‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:3725650/46‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:194439/46‑1 cGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGAT < 1:4096870/46‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:2235226/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTAT < 1:1470231/50‑1 GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTA > 2:494132/1‑49 CATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATA < 2:253766/50‑1 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 1:3057876/1‑50 ATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAG > 2:718431/1‑50 TTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 2:2760056/1‑50 TCCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 2:3949822/1‑49 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTC < 1:2293055/49‑1 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 2:2001245/1‑48 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:1267191/1‑48 CCCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGT > 1:889481/1‑48 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAG < 2:3669884/50‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 1:2827595/49‑1 CCAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCA < 2:3122658/49‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 2:4479768/50‑1 CAGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGG < 1:2679838/50‑1 AGCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGT > 1:4413972/1‑50 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 1:3920973/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 2:1105234/50‑1 GCCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTG < 2:3383216/50‑1 CCTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGG > 1:2736151/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 2:4195745/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 2:1223841/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG > 2:3675944/1‑50 CTCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGG < 2:2410085/50‑1 TCCTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG > 1:779066/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2349432/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT > 2:4306840/1‑50 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 2:1848078/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:2710371/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 1:323125/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCT < 2:613063/50‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGC < 2:3078008/49‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGG < 2:3284378/48‑1 CTGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGGCAGGTGGGGCT < 2:1909455/50‑1 TGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 1:1602671/1‑50 TGTGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT > 2:2339470/1‑50 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTT < 1:844823/50‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 2:4157330/48‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 2:4019848/48‑1 TGTTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTT < 2:1796220/48‑1 GTTGATTTCCAACGAGTATAACTTTGATTTATAGTCCGGTGGGGCTTTTC > 2:4064408/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT > 1:3377638/1‑50 TTGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCT < 2:2185102/50‑1 TGATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTC > 2:1061576/1‑50 ATTTCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCT < 1:833398/49‑1 TCCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTC < 2:136806/49‑1 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCcg > 2:892925/1‑48 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:2076303/49‑1 CCAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCT < 1:1747206/49‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 2:1385895/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 1:43228/1‑50 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC < 2:675869/50‑1 CAACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGC > 2:2746346/1‑50 AACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCC > 2:4477708/1‑50 ACGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCT > 1:1739080/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:1667124/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 2:632379/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTT > 1:4212921/1‑50 CGAGTATAACTTTGATTTATAGTCAGGTGGGCCTTTTATCTATCTGCCTT < 2:2971567/50‑1 GAGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTT < 1:1001614/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 1:4466115/50‑1 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC > 2:1415205/1‑50 AGTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTC < 2:831756/50‑1 GTATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCG > 1:1316963/1‑50 TATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGG > 2:950104/1‑50 ATAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 2:3896086/1‑50 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG < 1:4004745/50‑1 TAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > 1:4335978/1‑49 TATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3720585‑3720633‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGTG > NC_000913/3722076‑3722124 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |