| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,761,993 | Δ8,250 bp | rhsA–yibV | rhsA, yibA, yibJ, yibG, yibS, yibV | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3761993 | 3770242 | 8250 | 148 [0] | [0] 146 | rhsA–yibV | rhsA,yibA,yibJ,yibG,yibS,yibV |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 0 (0.000) | 142 (1.240) | 65/96 | 0.0 | 100% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 0 (0.000) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 148 total aligned reads displayed.
CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC < 2:2040592/50‑1CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC < 1:2530665/50‑1 GACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT < 1:3397321/50‑1 GACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT < 1:2098178/50‑1 ACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTC < 2:1106832/50‑1 ACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTC < 2:3323431/50‑1 ACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCT > 2:3283872/1‑49 CGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCA < 1:2568647/50‑1 GAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAA > 1:1663972/1‑50 GAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAA > 1:468346/1‑50 AGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAAT > 1:948939/1‑50 GTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATG < 2:3541800/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA < 1:4189654/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA < 1:4158850/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA > 1:3466888/1‑50 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA < 1:2104991/50‑1 TTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGA > 2:136348/1‑50 TCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGAT < 2:2237080/49‑1 CATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATC < 1:1962794/49‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCA < 1:1394410/50‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 1:1118933/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC < 2:4436076/49‑1 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC > 2:4514741/1‑49 ATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCC < 1:580827/49‑1 TGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAA < 2:3646350/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:2346691/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:3979613/50‑1 CCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT < 1:3285249/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 2:3636100/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA < 1:455649/50‑1 CGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAAT > 2:478695/1‑49 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAA < 1:2487533/50‑1 AGTCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 1:3826823/1‑48 TCCTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATA > 2:4007563/1‑46 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATA < 2:2898140/50‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATA < 1:3686661/50‑1 CTTTGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGAT > 1:2261448/1‑49 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG > 1:2175315/1‑50 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAAT < 1:931285/49‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA < 1:747565/48‑1 TGTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAA < 2:2886803/48‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG < 1:74865/49‑1 GTGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATG > 2:3465539/1‑49 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA < 2:4285333/50‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCA > 1:2668450/1‑50 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 2:2307560/49‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 2:438604/49‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 2:1122314/49‑1 TGCGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGC < 1:1020039/49‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 1:3649918/1‑50 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:2563941/49‑1 CGAGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCAT < 1:2561317/49‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 2:511193/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 2:4298694/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 1:1884664/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCA < 1:125822/50‑1 AGGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATC > 2:237677/1‑48 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 2:1005898/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 1:3635109/50‑1 GGAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAG < 2:1707452/50‑1 GAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGC > 2:1204562/1‑50 GAAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGC > 2:2532489/1‑50 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT > 1:658465/1‑50 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT < 2:3437702/50‑1 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT < 1:2721505/50‑1 AAAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCT < 1:3525267/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 2:4306443/50‑1 AAAATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTG < 1:1308052/50‑1 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 1:189967/1‑50 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 2:2395781/1‑50 AATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGT > 2:2822381/1‑50 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 2:4228328/50‑1 ATATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTC < 2:2600909/50‑1 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA > 2:2740152/1‑50 TATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCA < 1:2933721/50‑1 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:1559225/1‑50 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:137785/1‑50 ATCAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAT > 1:1246760/1‑50 CAGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC > 2:180415/1‑50 AGTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTC < 1:1964028/49‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTT < 2:1329757/50‑1 GTATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 1:1177974/1‑49 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTA < 1:406586/50‑1 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTA < 2:3995293/50‑1 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTA < 1:1748998/50‑1 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 2:2029404/1‑48 TATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCT > 2:1835766/1‑48 ATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:3190998/1‑50 ATGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:3311625/1‑50 TGGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG < 2:1169855/49‑1 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:4512692/1‑48 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:3949232/1‑48 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 2:3448837/1‑48 GGCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAG > 1:2366546/1‑48 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG < 2:2975640/50‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG < 2:1571916/50‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 1:1076573/49‑1 GCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCA < 2:3300662/49‑1 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC < 2:3971021/50‑1 CTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAG > 1:1453605/1‑49 CGACGAGTTTCATGCCGAGTCCTTTGTGCGAGGAAAAATATCAGTATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3761943‑3761992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGC > NC_000913/3770243‑3770291 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |