| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 77 (0.860) +CGAGATGGACG |
46/76 | 0.0 | 62.5% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 120 (1.030) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
Only 100 of 206 total aligned reads displayed.
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg > 1:1766892‑M2/50‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGt > 2:321377‑M2/49‑50 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGt < 1:212042‑M2/2‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACGAATTCGACAAAGCGCACAATCCGt < 2:1667968/50‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg < 2:2143179/49‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg < 2:2524586/49‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:243198/1‑50 (MQ=255) ttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTc > 2:1531890‑M2/48‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTc < 2:1248767‑M2/3‑1 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:4115680/1‑50 (MQ=255) aataaGGTTAAGGCCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 2:383197/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 2:305589/1‑50 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTccc < 1:461173‑M2/5‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTccc < 2:2893219‑M2/5‑1 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt < 2:3555515‑M2/7‑1 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 1:191785/1‑50 (MQ=255) aaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt > 2:1335278/1‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 2:1912847‑M2/8‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:151321‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 2:4552775/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:1400233/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 2:4037166/1‑50 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 2:4155107/50‑1 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg > 2:1574280/1‑50 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGc < 2:1772329‑M2/10‑1 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGc > 1:1034781‑M2/41‑50 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGc < 2:649337‑M2/10‑1 (MQ=255) tcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGc > 2:3273403‑M2/41‑50 (MQ=255) gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGc > 1:1950424/1‑50 (MQ=255) gTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGc > 2:4093124/1‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:4142429‑M2/39‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 2:2194283‑M2/39‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:1204228/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:3906693/1‑50 (MQ=255) acgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCgccccc > 1:4217475‑M2/37‑49 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 1:4405170/1‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 2:3697458/1‑50 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt > 1:3062389/1‑50 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct < 1:1690881‑M2/15‑3 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt > 1:3689528‑M2/35‑50 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 2:3535862/1‑50 (MQ=255) ggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTg > 2:2467767‑M2/34‑50 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg > 2:763916/1‑50 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg > 2:52728/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 2:2635995/1‑50 (MQ=255) tgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 2:1898901‑M2/31‑49 (MQ=255) tgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 2:1064876‑M2/31‑49 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgggg < 1:395726/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:3199086/1‑49 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2912896/1‑49 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2502173/1‑49 (MQ=255) gcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:3597206‑M2/30‑48 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:273154/1‑47 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 2:3636984/1‑47 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag > 2:2532378‑M2/27‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg > 1:892578/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 2:4427665/1‑50 (MQ=255) aaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:335333/1‑49 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGtt < 1:752553‑M2/28‑1 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:4079707‑M2/29‑1 (MQ=255) ttCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAg > 1:4011903/1‑50 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg > 2:1213904‑M2/21‑50 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg < 2:1778428‑M2/30‑1 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:444080/1‑50 (MQ=255) gaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg < 2:1003519‑M2/31‑1 (MQ=255) gaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAgg > 1:2966117‑M2/20‑50 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGCGAGGGTTAggg > 1:1817683‑M2/19‑50 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:187373‑M2/32‑1 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:2298760‑M2/32‑1 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg > 1:2757488‑M2/19‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 2:2436426/49‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt < 1:613517/50‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt < 1:3790820/50‑1 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:1580613‑M2/33‑1 (MQ=255) aCAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 2:2384700/1‑49 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:262273‑M2/16‑48 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:1252593‑M2/16‑48 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 2:1429022‑M2/35‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGa < 2:1868663/50‑1 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGACAGGGTTAGGGTGAg > 2:2345513/1‑50 (MQ=255) tacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg > 1:961004‑M2/14‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg > 2:58080‑M2/13‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg < 1:1118511‑M2/37‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 2:3949485/50‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGCGTTAGGGCGAggg > 1:1559237/1‑50 (MQ=17) gcgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg > 1:298988/1‑49 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgggg < 1:4310484‑M2/39‑1 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgggg < 1:4544055‑M2/39‑1 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg < 2:2813295‑M2/38‑1 (MQ=255) cgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAggg < 2:254944‑M2/38‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:2172634/1‑48 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:156793/1‑48 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:3260308/1‑48 (MQ=255) caATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcag > 1:277826/1‑50 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc < 2:3744945/50‑1 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:1987227/1‑50 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:1596735/1‑50 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:3935940/1‑50 (MQ=255) aTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 2:1809857/1‑49 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGAGTGAGGGGAACAGCCAGCa > 1:3288282/1‑50 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |