New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 2066304 | NA (NA) | 166 (1.420) | 78/98 | 0.0 | 100% | noncoding (1050/1195 nt) | IS5 | repeat region |
? | NC_000913 | 2080592 = | 0 (0.000) | intergenic (‑1/+197) | yeeA/sbmC | putative transporter YeeA/DNA gyrase inhibitor |
Only 100 of 168 total aligned reads displayed.
GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 | cagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:211893‑M2/50‑50 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg < 1:1514371‑M2/1‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:59252‑M2/49‑49 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:3569275‑M2/2‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 1:143979‑M2/2‑1 (MQ=255) agcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGc < 2:2917038‑M2/2‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttg > 1:1935458‑M2/48‑48 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 2:2653441‑M2/3‑1 (MQ=255) gcctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCa < 1:3399043‑M2/3‑1 (MQ=255) cctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg < 2:4320512‑M2/4‑1 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:4014914‑M2/46‑49 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAg > 1:2142068‑M2/46‑49 (MQ=255) ctatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa < 2:3437995‑M2/5‑1 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 1:3488502‑M2/45‑49 (MQ=255) tatttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGa > 2:2101327‑M2/45‑49 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGaaa < 1:2339498‑M2/7‑1 (MQ=255) tttagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAAc > 1:4136307‑M2/43‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACt < 2:1511943‑M2/9‑1 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc > 2:4482866‑M2/41‑50 (MQ=255) tagaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc > 1:3615417‑M2/41‑50 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:539083‑M2/10‑1 (MQ=255) agaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTc < 1:3867911‑M2/10‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 2:399259‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTcc < 1:985072‑M2/11‑1 (MQ=255) gaccgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCg < 2:1376652‑M2/12‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa > 2:1152091‑M2/36‑50 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 2:1024403‑M2/15‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 1:315776‑M2/15‑1 (MQ=255) cgtttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTaa < 2:3728176‑M2/15‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCgtact > 2:1635580‑M2/34‑47 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 2:2940457‑M2/34‑49 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:304567‑M2/17‑1 (MQ=255) tttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATg < 1:1722417‑M2/17‑1 (MQ=255) ttcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 2:579960‑M2/33‑48 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 1:1745640‑M2/32‑47 (MQ=255) tcttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATga < 1:2030359‑M2/18‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAAt > 2:4407640‑M2/31‑46 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:3122988‑M2/19‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 2:1729196‑M2/19‑1 (MQ=255) cttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgag < 1:4336730‑M2/19‑1 (MQ=255) ttcgtcatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 2:754545‑M2/30‑50 (MQ=255) ttcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:1805047‑M2/30‑50 (MQ=255) tcgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt > 1:1086613‑M2/29‑49 (MQ=255) cgccatttacggcgttatccccagtttGCAGAAAATCCGTAATGCGAtt > 2:2785728‑M2/28‑49 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATgaga < 1:3236489‑M2/20‑1 (MQ=255) cgccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGAt < 2:191962‑M2/21‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 1:1263209‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 2:866913‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 2:671872‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa < 2:816863‑M2/24‑1 (MQ=255) gccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTa > 2:4075906‑M2/27‑49 (MQ=255) ccatttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:1646944‑M2/26‑49 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2543804‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:2195631‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaaaa < 1:504999‑M2/26‑1 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2072199‑M2/25‑48 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 2:1592330‑M2/25‑48 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:2065156‑M2/25‑48 (MQ=255) catttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTaa > 1:1004574‑M2/25‑48 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg > 2:3445257‑M2/24‑50 (MQ=255) atttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAg < 1:646697‑M2/27‑1 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 2:2342559‑M2/23‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 2:3137620‑M2/23‑50 (MQ=255) tttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgc > 2:3176796‑M2/23‑50 (MQ=255) ttaaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg > 1:2353500‑M2/22‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcgc > 1:1248663‑M2/21‑50 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:1007989‑M2/29‑1 (MQ=255) taaggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAgcg < 1:2675914‑M2/29‑1 (MQ=255) aggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTc < 1:4482302‑M2/32‑1 (MQ=255) ggcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCa > 1:42487‑M2/18‑50 (MQ=255) gcgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt < 1:3009680‑M2/34‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCAt > 2:2458368‑M2/16‑49 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:1576195‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 2:193440‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 2:3788349‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:4453426‑M2/35‑1 (MQ=255) cgttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATa < 1:3415172‑M2/35‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa < 1:1510208‑M2/36‑1 (MQ=255) gttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATaa > 1:3140455‑M2/15‑50 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc < 1:1984699‑M2/37‑1 (MQ=255) ttatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAAc > 1:4205751‑M2/14‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 2:3222869‑M2/13‑50 (MQ=255) tatccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt > 2:3907340‑M2/13‑50 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 1:4114467‑M2/38‑1 (MQ=255) atccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACt < 2:2162638‑M2/38‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:855620‑M2/40‑1 (MQ=255) tccccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCa < 1:2103482‑M2/40‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:534965‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:2299381‑M2/42‑1 (MQ=255) cccagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATc < 1:1725210‑M2/42‑1 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:2938190‑M2/7‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg > 1:794277‑M2/7‑50 (MQ=255) cagtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTg < 1:1660757‑M2/44‑1 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 2:377069‑M2/6‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt > 1:646235‑M2/6‑50 (MQ=255) agtttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGt < 2:1807080‑M2/45‑1 (MQ=255) tttGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCg < 1:2239013‑M2/47‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 1:3967789‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCgg < 2:1463557‑M2/48‑1 (MQ=255) tGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGc > 1:740438‑M2/2‑50 (MQ=255) | GGCGGTATACCCGGATTTCAAACGGGCTTAATGACTTATCGGCACGCACGCAGAAACTCCGTAATGAGATTAAAAGCGCTCATAACTCATCTGTCGGC > NC_000913/2080543‑2080640 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |