| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 125 [0] | [0] 125 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 124 (0.820) | 67/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 124 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:3903270/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 2:2394867/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 2:3020461/50‑1 AATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT > 1:5064977/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1021205/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:2010048/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:4650054/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 2:893686/50‑1 CATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 2:5163768/1‑50 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 2:908965/50‑1 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:613237/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:1949759/50‑1 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:2566856/1‑49 TCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 2:4059176/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 2:1736112/1‑49 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 2:5086887/1‑50 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 2:479824/1‑50 TCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA > 1:5071199/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 2:3548648/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 2:3692545/1‑50 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 2:4774488/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:2307936/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 2:1337428/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:3068913/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 2:2780308/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:5688497/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:707743/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 2:5751107/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:3937666/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 2:3423912/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:3498078/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 2:3300826/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:2703459/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 2:5835647/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC < 1:421481/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT > 1:2837541/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:3505910/49‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 2:503754/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 2:4867651/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 2:4913533/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:3159250/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1148248/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGT < 2:2772103/50‑1 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 2:3703150/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:350197/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:86363/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 2:2721063/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 2:5826565/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 2:4995382/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 2:790698/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:4650034/49‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:3637793/49‑1 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCC > 2:3912330/1‑50 ATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGC < 2:3098994/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 2:1768776/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:4382902/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:5379737/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:734559/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:5007797/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 2:3650490/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 2:5586106/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 2:3756333/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:1551406/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:5595670/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:3981214/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 2:4760828/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 2:3259763/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 2:1664557/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 2:3556450/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:2096580/50‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAA < 1:552823/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 2:3000393/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 2:2633628/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:5000613/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 2:1975430/1‑48 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:194785/1‑48 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:3052120/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 2:143627/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:166872/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 2:1291991/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 2:260461/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 2:5068306/49‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG < 2:1802498/49‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:4711649/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT < 1:1154072/50‑1 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:1139622/1‑50 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 2:4626464/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 2:4599022/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 2:1980971/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 2:1964657/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:5740135/50‑1 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:4040646/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:3000355/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG > 2:1578330/1‑50 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:2425925/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACG < 1:176747/50‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1600184/49‑1 TACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTAC < 1:1031755/49‑1 CCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCG < 2:2081685/50‑1 CATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 2:1240727/1‑50 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |