| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,388,889 | Δ9,734 bp | ycjG–[uspE] | ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH‑4, ynaJ, [uspE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1388889 | 1398622 | 9734 | 195 [0] | [0] 196 | ycjG–[uspE] | ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH‑4,ynaJ,[uspE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1388888 | 0 (0.000) | 193 (1.300) | 79/96 | 0.0 | 100% | intergenic (‑77/‑42) | tpx/ycjG | lipid hydroperoxide peroxidase/L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1398623 = | 0 (0.000) | intergenic (‑1/+151) | uspE/fnr | universal stress protein with a role cellular motility/DNA‑binding transcriptional dual regulator FNR | |||||
Only 100 of 194 total aligned reads displayed.
ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388840‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGAT > NC_000913/1398623‑1398670 ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA < 1:3867936/50‑1ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA < 1:3785100/50‑1ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA < 2:5541253/50‑1ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:1733655/1‑50ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT < 2:2683527/49‑1 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 1:2253536/1‑48 GTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTA > 2:2740219/1‑48 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG > 1:5820600/1‑50 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG < 1:1526374/50‑1 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG < 1:3036078/50‑1 TCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAG > 1:2114409/1‑50 CACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGG > 2:3207095/1‑50 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGG < 2:2689686/50‑1 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGG < 1:5049985/49‑1 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGG < 1:5309257/49‑1 ACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGG < 2:4777349/49‑1 CACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGT < 2:4695259/50‑1 CACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGT < 2:5792613/50‑1 ACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTC < 2:5469599/50‑1 ACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTC > 1:3341368/1‑50 CCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT < 2:2272673/50‑1 CCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCT > 2:157510/1‑50 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTC < 2:3446979/50‑1 CTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTC < 1:3728183/50‑1 TAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCC > 1:1905289/1‑50 TAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCC > 2:1538307/1‑50 TAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCC > 1:4122162/1‑50 GTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCT > 2:1640019/1‑49 GTTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCT > 1:1386308/1‑49 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 1:2597179/1‑50 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA < 2:2453189/50‑1 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA < 1:1694756/50‑1 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA < 1:1236585/50‑1 TTTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 1:1055892/1‑50 TTATGCTAACTGTCAATAATACAGCAAACGCTATTACAGGGTCTCCTTA > 2:860265/1‑49 TTATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTA > 2:1165864/1‑49 TATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC < 2:1759068/49‑1 TATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTAC < 2:5006159/49‑1 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACA < 2:1842922/49‑1 ATGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACA < 1:5617155/49‑1 TGCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAA < 2:5717244/49‑1 GCTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAAC > 2:4042021/1‑49 CTAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACA < 2:1930669/49‑1 TAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC > 1:5510314/1‑50 TAACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC > 2:4323647/1‑50 AACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT > 2:1131147/1‑50 AACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT > 1:776379/1‑50 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 1:3114920/49‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 2:4971838/49‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACT < 1:154213/49‑1 ACTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAAC < 1:997057/48‑1 CTGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT > 2:1312708/1‑50 TGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT > 2:2997955/1‑49 TGTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGT > 1:101725/1‑49 GTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTC > 1:4419927/1‑49 GTCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTC > 2:2784438/1‑49 TCAATAACACAGCAAACGCTATTACAGTGTCTCCTTACAACAACTGTCA < 2:5699609/49‑1 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACATCAACTGTCAA < 2:661622/50‑1 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAg < 1:2293995/50‑2 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA > 2:2821562/1‑50 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA > 1:4774676/1‑50 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAA > 1:295177/1‑50 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCA < 2:616393/49‑1 TCAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCA < 2:1383028/49‑1 CAATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC > 2:3785116/1‑50 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACG > 1:2579818/1‑50 AATAACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAAC < 2:2248437/49‑1 AACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG > 2:2551023/1‑50 AACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG > 1:5491742/1‑50 AACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG > 1:868995/1‑50 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 1:4924700/49‑1 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 2:2029182/49‑1 ACACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAG < 2:3570857/49‑1 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT < 1:541113/50‑1 CACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTT < 1:2853586/50‑1 ACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTT < 2:425863/50‑1 ACAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTT < 2:4488549/50‑1 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG > 2:5684257/1‑50 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG > 1:1667229/1‑50 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG < 2:3418244/50‑1 CAGCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTG < 1:2689167/50‑1 cGCAAACGCTATTACAGGGTCTCATTACAACAACTTTCAACGCAGTTTGT < 1:1947213/49‑1 GCAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTA < 2:5316690/50‑1 CAAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAA < 2:5766984/50‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT > 2:3640149/1‑50 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT < 1:4005374/50‑1 AAACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAAT > 2:4135570/1‑50 AACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATT < 1:637187/50‑1 AACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATT < 1:4237368/50‑1 ACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTA < 1:5207339/50‑1 ACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTA < 2:1228578/50‑1 ACGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATT > 1:3241690/1‑49 CGCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTA > 1:3442197/1‑49 GCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:2686912/1‑49 GCTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 2:2835601/1‑49 CTATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAA < 1:3320686/50‑1 TATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:4561219/1‑47 TATTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAA > 1:5390703/1‑47 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGAT < 2:4382217/50‑1 TTACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGAT < 1:4748447/50‑1 ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/1388840‑1388888‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tACAGGGTCTCCTTACAACAACTGTCAACGCAGTTTGTAATTAAAAGAT > NC_000913/1398623‑1398670 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |