| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 152 [0] | [0] 154 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 150 (0.990) | 70/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
Only 100 of 150 total aligned reads displayed.
CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC < 2:336714/50‑1CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC > 1:1332552/1‑50 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:2584897/1‑50 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC < 1:4887086/50‑1 CAAAACAGCTTTCGCTACGTTGCTGGATCGTTTTAACACGGAG‑AAGTGCC > 1:1546178/1‑50 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 1:4285754/50‑1 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGA‑TAAGTGCCTA > 1:1747545/1‑50 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 1:1173620/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 2:3261415/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 2:2680833/1‑50 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA > 1:2899061/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC < 1:4002846/50‑1 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 2:4792338/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 2:642504/1‑50 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTTCACT < 2:112206/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 2:1625320/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 1:4240455/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 2:2730292/1‑49 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 2:4571669/50‑1 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 1:4243568/50‑1 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 2:3499668/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 1:602069/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 2:3718238/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 2:5125920/50‑1 TTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG > 2:2370993/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:667174/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:4104212/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:4557032/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 2:3970155/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 2:2882496/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:2844239/48‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:5598069/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:1344459/49‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:5017062/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 2:5092662/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:434728/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 2:5537624/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:3780036/50‑1 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT > 2:2082858/1‑50 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT < 2:1866632/50‑1 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 2:4006231/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 2:4315249/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:352939/1‑50 ACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC > 2:5631946/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT < 2:2473546/50‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCT < 2:2106867/50‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:3973607/48‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 2:3226322/48‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:5155103/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 2:1472566/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:1320979/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:5292295/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT > 2:4866126/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT > 1:2691199/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT > 2:1515890/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 2:2879887/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:4557383/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:5625120/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:5765545/49‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG < 2:3496563/50‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT < 1:4157851/49‑1 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:4075706/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:5488209/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:2395527/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:1048373/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:2364159/1‑50 GGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:4818464/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:4207225/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 1:480650/49‑1 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA < 2:4879190/50‑1 TCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC > 2:3949351/1‑50 TCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC > 1:3397875/1‑50 CGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC > 1:5365592/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 2:708950/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:3709090/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC < 2:2564466/48‑1 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:1147387/1‑50 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 2:4365013/1‑50 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC < 2:5178021/50‑1 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:2553363/1‑49 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 2:625245/1‑49 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA > 2:5729446/1‑50 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCT < 1:4194896/49‑1 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA < 1:3222370/49‑1 TAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA < 1:671550/49‑1 AACACGGAG‑AAGTGCCTACACTAGCGGGCTTCTTTTTGTTAACCCCTACC > 1:5244136/1‑50 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC < 1:5533983/49‑1 AACACGG‑GGAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAC < 1:5705082/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 1:817800/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 2:1879718/49‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 2:1662282/50‑1 ACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA > 2:3576493/1‑50 ACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA < 1:2833885/50‑1 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 2:1245318/3‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:5437290/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:667426/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 2:1235762/1‑50 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 2:3337191/50‑1 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA < 1:3154686/50‑1 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA < 2:4021756/50‑1 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |