| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 168 (1.110) | 80/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 169 total aligned reads displayed.
CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGG > NC_000913/377269‑377366 | aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:970264‑M2/49‑50 (MQ=255)aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:2153193‑M2/49‑50 (MQ=255)aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa < 1:5557070‑M2/2‑1 (MQ=255)aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:5376339‑M2/49‑50 (MQ=255) tcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGATa < 2:2024773‑M2/4‑1 (MQ=255) cgacaggtaatcactcatactgaacagcgataaaagataaaggtgGAt > 2:4088357‑M2/46‑48 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAg > 1:1751350‑M2/45‑50 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAg < 1:2421458‑M2/6‑1 (MQ=255) acaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGt < 1:4019128‑M2/7‑1 (MQ=255) acaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGt > 1:2896006‑M2/44‑50 (MQ=255) caggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTc > 1:1057675‑M2/43‑50 (MQ=255) caggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTc > 1:65527‑M2/43‑50 (MQ=255) caggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTc > 1:3575281‑M2/43‑50 (MQ=255) caggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTc < 2:503479‑M2/8‑1 (MQ=255) aggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCg < 1:1286394‑M2/9‑1 (MQ=255) aggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCg > 2:2203299‑M2/42‑50 (MQ=255) aggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCg < 2:5526279‑M2/9‑1 (MQ=255) ggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGt > 2:3365885‑M2/41‑50 (MQ=255) ggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGt < 1:1511892‑M2/10‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTg < 2:276389‑M2/11‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTg < 1:4340339‑M2/11‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTg < 2:1979485‑M2/11‑1 (MQ=255) taatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgc > 2:3560506‑M2/39‑50 (MQ=255) taatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgc > 1:3111688‑M2/39‑50 (MQ=255) taatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgc > 2:528108‑M2/39‑50 (MQ=255) aatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 2:1194428‑M2/38‑50 (MQ=255) aatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 1:4184870‑M2/38‑50 (MQ=255) atcactcatgctgaacagcgataaaagataaaggtaTATAAGTCGTgcg < 2:5373206‑M2/13‑1 (MQ=255) atcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 1:3143146‑M2/37‑49 (MQ=255) tcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 2:4357427‑M2/36‑48 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 1:3388761‑M2/34‑46 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAg < 1:3054736‑M2/16‑1 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGa < 2:1115130‑M2/17‑1 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGa < 1:4688834‑M2/17‑1 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt > 1:3817762‑M2/33‑50 (MQ=255) tcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg > 2:2566993‑M2/32‑50 (MQ=255) tcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg > 2:3037533‑M2/32‑50 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg < 2:713193‑M2/19‑1 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGcc > 2:4259660‑M2/30‑50 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGc < 2:1791509‑M2/20‑1 (MQ=255) tactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt < 2:1157787‑M2/22‑1 (MQ=255) actgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt > 2:1629994‑M2/28‑49 (MQ=255) actgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt > 1:3444649‑M2/28‑49 (MQ=255) tgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGAt > 2:3866308‑M2/26‑50 (MQ=255) aacagcgataaaggataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc < 1:5743572‑M2/27‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGAt < 2:4110153‑M2/25‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATg < 1:2002289‑M2/26‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc > 2:1874567‑M2/24‑50 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc > 2:586841‑M2/24‑50 (MQ=255) acagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc > 2:3968287‑M2/23‑49 (MQ=255) cagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGa < 1:2681571‑M2/29‑1 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc > 1:5017199‑M2/21‑50 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc > 2:2265691‑M2/21‑50 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc < 1:1928374‑M2/30‑1 (MQ=255) gcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACg < 1:2818317‑M2/31‑1 (MQ=255) cgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc > 2:2396069‑M2/19‑50 (MQ=255) cgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc > 2:3419429‑M2/19‑50 (MQ=255) cgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc > 2:1247758‑M2/19‑50 (MQ=255) cgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc < 1:2880550‑M2/32‑1 (MQ=255) gataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCt < 2:564558‑M2/33‑1 (MQ=255) ataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTa > 2:3744221‑M2/17‑50 (MQ=255) taaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAt > 1:2959946‑M2/16‑50 (MQ=255) taaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAt > 2:2846150‑M2/16‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 1:3169069‑M2/15‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 2:510064‑M2/15‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 1:4346468‑M2/15‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 1:4301396‑M2/15‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 2:3904982‑M2/15‑50 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 1:4624309‑M2/37‑1 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 2:2181521‑M2/37‑1 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 2:2130523‑M2/37‑1 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 2:520416‑M2/37‑1 (MQ=255) aagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcg > 1:5204424‑M2/13‑50 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc > 2:2536359‑M2/12‑50 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc > 1:3712516‑M2/12‑50 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc < 1:3882959‑M2/39‑1 (MQ=255) gataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGcgcg > 2:1081111‑M2/11‑50 (MQ=255) ataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt > 2:189208‑M2/10‑50 (MQ=255) taaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTc < 1:47850‑M2/42‑1 (MQ=255) taaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTc > 2:5615275‑M2/9‑50 (MQ=255) aaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 2:4823962‑M2/8‑50 (MQ=255) aaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 2:4940466‑M2/8‑50 (MQ=255) aggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTa < 2:2758294‑M2/45‑1 (MQ=255) aggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTa > 1:686415‑M2/6‑50 (MQ=255) aggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTa > 1:4176321‑M2/6‑50 (MQ=255) ggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt < 2:3908821‑M2/46‑1 (MQ=255) ggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt < 1:851913‑M2/46‑1 (MQ=255) ggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:1527345‑M2/5‑50 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:2508301‑M2/4‑49 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 2:3782562‑M2/4‑49 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:3290344‑M2/4‑49 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATc < 1:5134306‑M2/47‑1 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATc < 1:5726461‑M2/47‑1 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:2600540‑M2/3‑48 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:2157279‑M2/3‑48 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCa < 1:1342887‑M2/48‑1 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCa < 1:5777134‑M2/48‑1 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCa < 2:4814702‑M2/48‑1 (MQ=255) gGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAg > 1:205988‑M2/2‑50 (MQ=255) gGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAg > 1:3067115‑M2/2‑50 (MQ=255) | CCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGG > NC_000913/377269‑377366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |