| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 122 [0] | [0] 124 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 115 (0.790) | 72/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 124 total aligned reads displayed.
GTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTAC > NC_000913/3653667‑3653764 | caatttaaccatcttagcataaaacaaacgatgaataaggaattttatat < 2:5703900‑M2/2‑1 (MQ=255)caatttaaacatcttagcataaaacaaatgatgaataaggaattttatat > 1:4621448‑M2/49‑50 (MQ=255)caatttaaacatcttagcataaaacaaatgatgaataaggaattttata < 1:2304178‑M2/1‑1 (MQ=255) aatttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt < 2:5700550‑M2/3‑1 (MQ=255) aatttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt > 1:888546‑M2/48‑50 (MQ=255) aatttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt < 1:5720151‑M2/3‑1 (MQ=255) atttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt > 2:4430608‑M2/47‑49 (MQ=255) atttaaacatcttagcataaaacaaatgatgaataaggaattttatAtt > 1:4645723‑M2/47‑49 (MQ=255) atttaaacatcttagcataaaacaaatgatgaataaggaattttatATTg < 2:3885827‑M2/4‑1 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa > 2:787696‑M2/46‑50 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa < 2:3162438‑M2/5‑1 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa < 2:2685303‑M2/5‑1 (MQ=255) tttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGa > 1:4760256‑M2/46‑50 (MQ=255) ttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGat > 2:4853976‑M2/45‑50 (MQ=255) ttaaacatcttagcataaaacaaatgatgaataaggaattttatATTGat > 2:292335‑M2/45‑50 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatAttgct > 2:5649133‑M2/44‑47 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatATTGat < 2:2316844‑M2/6‑1 (MQ=255) taaacatcttagcataaaacaaatgatgaataaggaattttatATTGat > 2:3439702‑M2/44‑49 (MQ=255) aaacatcttagcataaaacaaatgatgaataaggaattttatATTGatta > 1:4667461‑M2/43‑50 (MQ=255) aaacatcttagcataaaacaaatgatgaataaggaattttatATTGatt < 2:2722735‑M2/7‑1 (MQ=255) aaacatcttagcataaaacaaatgatgaataaggaattttatATTGatt < 1:793911‑M2/7‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGattat > 1:904595‑M2/42‑50 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGattat < 1:4428945‑M2/9‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGatta < 2:376725‑M2/8‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGatta < 2:1214530‑M2/8‑1 (MQ=255) aacatcttagcataaaacaaatgatgaataaggaattttatATTGatta < 2:767650‑M2/8‑1 (MQ=255) acatcttagcataaaacaaatgatgaataaggaattttatATTGattatt < 1:4267587‑M2/10‑1 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGattat > 1:5188039‑M2/40‑48 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 1:330890‑M2/11‑1 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 1:3140509‑M2/11‑1 (MQ=255) catcttagcataaaacaaatgatgaataaggaattttatATTGAttatta < 1:720920‑M2/11‑1 (MQ=255) atcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg < 1:2579202‑M2/12‑1 (MQ=255) atcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg < 1:5283422‑M2/12‑1 (MQ=255) tcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg > 1:4888925‑M2/38‑49 (MQ=255) tcttagcataaaacaaatgatgaataaggaattttatATTGATTATTAg > 1:5213779‑M2/38‑49 (MQ=255) cttagcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa > 1:2403563‑M2/37‑50 (MQ=255) ttagcataaaacaaatgatgaataaggaattttatATTGATTATTAGCAc > 2:4290788‑M2/36‑50 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCa < 2:3076604‑M2/14‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 1:471124‑M2/34‑50 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACt < 2:1458371‑M2/16‑1 (MQ=255) agcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACt < 1:1137623‑M2/16‑1 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 2:3088855‑M2/33‑49 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATTAGCACtt > 1:1761485‑M2/33‑49 (MQ=255) gcataaaacaaatgatgaataaggaattttatATTGATTATGAGCACttt < 2:4102051‑M2/18‑1 (MQ=255) cataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTta > 2:2054184‑M2/32‑50 (MQ=255) cataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTta < 1:1065153‑M2/19‑1 (MQ=255) ataaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTtat < 1:2419920‑M2/20‑1 (MQ=255) taaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTtat > 1:3430878‑M2/30‑49 (MQ=255) taaaacaaatgatgaataaggaattttatATTGATTATTAGCACTTtat > 2:3453474‑M2/30‑49 (MQ=255) aaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAAt < 2:695647‑M2/23‑1 (MQ=255) aaacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAAt > 1:5024063‑M2/28‑50 (MQ=255) aacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAAt > 2:2460415‑M2/27‑49 (MQ=255) aacaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATc < 2:1436314‑M2/24‑1 (MQ=255) acaaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCa < 2:4620461‑M2/25‑1 (MQ=255) caaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAt < 1:4314506‑M2/26‑1 (MQ=255) aaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt > 1:2019823‑M2/24‑50 (MQ=255) aaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt > 1:4792469‑M2/24‑50 (MQ=255) aaatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt < 2:1241964‑M2/27‑1 (MQ=255) aatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCAtt > 2:2337095‑M2/23‑49 (MQ=255) aatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTg < 1:5106483‑M2/28‑1 (MQ=255) aatgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTg < 1:4341508‑M2/28‑1 (MQ=255) atgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGa < 2:1929827‑M2/29‑1 (MQ=255) tgatgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGaa < 2:3391397‑M2/30‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAAt > 2:678733‑M2/19‑49 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:3623941‑M2/32‑1 (MQ=255) atgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa < 1:5418318‑M2/32‑1 (MQ=255) tgaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATa > 2:3356990‑M2/18‑49 (MQ=255) gaataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaa > 1:918452‑M2/17‑49 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGATTaaaa < 2:1701473‑M2/35‑1 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaa < 1:4499017‑M2/35‑1 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaa < 2:5385973‑M2/35‑1 (MQ=255) aataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaa > 1:3135580‑M2/16‑49 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa < 2:5821897‑M2/36‑1 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 1:2227000‑M2/15‑50 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa < 2:1852314‑M2/36‑1 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 1:1541107‑M2/15‑50 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 2:1068377‑M2/15‑50 (MQ=255) ataaggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 1:5002060‑M2/15‑50 (MQ=255) taaggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAAt < 1:3522140‑M2/37‑1 (MQ=255) taaggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAAt < 1:2525429‑M2/37‑1 (MQ=255) taaggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAAt < 1:5403978‑M2/37‑1 (MQ=255) taaggaagtttatAATGATTATTAGCACTTTATAATCATTGAATAAAAAt < 2:5432127‑M2/37‑1 (MQ=255) aggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 2:4987243‑M2/12‑47 (MQ=255) ggaattttatATTGATTATTAGCACTTTATAATCATTGAGTAAAAATAGa < 1:3691091‑M2/40‑1 (MQ=255) ggaattttatATTGATTATTAGCACTTTATAATCATTGAATaaaaa > 1:2731452‑M2/11‑46 (MQ=255) ggaattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGa < 1:1584070‑M2/40‑1 (MQ=255) aattttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAtt > 2:2439796‑M2/9‑50 (MQ=255) attttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAttt > 1:59349‑M2/8‑50 (MQ=255) ttttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAtttt < 1:2807948‑M2/44‑1 (MQ=255) tttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTa > 1:909490‑M2/6‑50 (MQ=255) ttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTa < 2:3973968‑M2/45‑1 (MQ=255) ttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTa < 2:3960069‑M2/45‑1 (MQ=255) ttatATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTa < 1:5375356‑M2/45‑1 (MQ=255) atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATg > 2:3113262‑M2/3‑49 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGt < 2:3476042‑M2/48‑1 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTa < 1:3060885‑M2/49‑1 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTa > 2:2705447‑M2/2‑50 (MQ=255) tATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTa < 1:2159037‑M2/49‑1 (MQ=255) atTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTAc > 1:1578762/1‑50 (MQ=255) atTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTAc > 1:2156784/1‑50 (MQ=255) | GTAAAAGAATTCGCTTATCAAATCATTACCAGAATATAATACCATAATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTAC > NC_000913/3653667‑3653764 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |