| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 116 [0] | [0] 117 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 116 (1.230) | 67/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 116 total aligned reads displayed.
TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT > 1:5919389/1‑50TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:5955183/50‑1TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAT < 1:6825443/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:6823086/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC < 1:2405744/50‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:1585349/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:3221881/1‑50 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:1644646/49‑1 ATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATT < 1:4886035/49‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCC < 1:1866786/50‑1 TCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTC > 1:857771/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCAT < 1:892681/50‑1 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:2790688/1‑49 ATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCA > 1:2305311/1‑49 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA > 1:1881367/1‑50 TTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATA < 1:3644460/50‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:1782168/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT < 1:4181643/49‑1 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:6356316/1‑49 CTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATAT > 1:3933123/1‑49 CGTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC > 1:4080621/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:2087247/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG > 1:2894507/1‑50 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACG < 1:3839083/50‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:2313782/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:4835583/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAAC < 1:6503357/49‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:2303117/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:7087375/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAA < 1:1052528/48‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:5200451/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:1988908/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:4288790/47‑1 GTTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATA < 1:6235975/47‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG > 1:1009130/1‑50 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:5884835/50‑1 TTTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGG < 1:854297/50‑1 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:2940554/1‑50 TTACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGC > 1:4666082/1‑50 TACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCC > 1:1241795/1‑50 ACGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC > 1:1050409/1‑50 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:1798759/50‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:6730928/49‑1 CGTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCC < 1:2566147/49‑1 CGTTATAATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCT < 1:4211081/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:4739809/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG < 1:1250251/50‑1 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:294022/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:3952732/1‑50 GTTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:1796261/1‑50 TTATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTG > 1:2418862/1‑49 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:6508922/1‑50 TATCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTA > 1:4700479/1‑50 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:3678152/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACG < 1:3059664/50‑1 TCATTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTAC < 1:4798635/49‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:6594695/50‑1 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT > 1:1199244/1‑50 TTCACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCT < 1:375281/50‑1 CACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTG > 1:4059481/1‑49 ACTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGA > 1:3008078/1‑50 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC < 1:3559621/50‑1 CTTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGAC > 1:2298183/1‑50 TTTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:3714862/1‑50 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:6969817/1‑49 TTACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG > 1:89886/1‑49 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:1831109/1‑50 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:5901874/48‑1 TACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACG < 1:5712910/48‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:4399748/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:6311505/49‑1 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:3437860/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA > 1:5246878/1‑49 ACATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGA < 1:58981/49‑1 CATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGAT < 1:473665/49‑1 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:6994370/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:3500576/1‑49 ATCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:517561/1‑49 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:3925442/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAA < 1:3073718/50‑1 TCAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATA > 1:3947406/1‑48 CAGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAG > 1:1112447/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:4546615/50‑1 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:449589/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC > 1:2872585/1‑50 AGAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGC < 1:6537081/50‑1 GAGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCG < 1:4806854/50‑1 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:2246871/1‑50 AGATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGT > 1:1652682/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:6417283/1‑50 GATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:2906822/1‑50 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTT < 1:458705/50‑1 ATATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTT > 1:5304444/1‑49 TATACCATTCCATATAACGGCCCTGTACGCTTGGACGGATAAAGCGCTTA > 1:3085737/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:5148658/1‑50 TATACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTA > 1:758373/1‑50 ACCATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGC > 1:4324294/1‑50 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC < 1:4667712/50‑1 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:3069853/1‑49 ATTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGA > 1:4341392/1‑49 TAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/167435‑167483‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TTCCATATAACGGCCCTGTACGCCTGGACGGATAAAGCGTTTACGCGAC > NC_000913/173448‑173496 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |