| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 85 [0] | [0] 83 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 83 (0.880) | 53/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:1514418/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:64655/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:88034/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:727559/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGTATTATTGAC > 1:401297/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:4252193/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 1:2985360/50‑1 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:1341215/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:515924/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:1181566/49‑1 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:4820738/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:6087368/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:5900163/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:6147851/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:4473065/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:4470840/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:3720211/49‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:2136471/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA < 1:5809465/50‑1 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA < 1:1165248/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:5767890/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:5937660/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:6167998/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:1724768/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:2384560/50‑1 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 1:13512/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:1383806/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:3091040/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:3141845/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:7019865/49‑1 GGTCAGATCCGGCGCATCGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:4217363/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:4413262/1‑49 TCCGAACCGGCACAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA < 1:6668605/50‑1 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:2563769/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:2373502/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCAC < 1:890446/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:2687229/1‑49 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA < 1:6720586/50‑1 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:516093/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:6257071/1‑50 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:4692460/1‑49 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA > 1:620521/1‑50 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 1:6589201/1‑50 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATC < 1:6156917/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATC < 1:2086928/50‑1 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:6578604/50‑1 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA < 1:5335921/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:5698596/50‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCCTTT > 1:1220374/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT > 1:100913/1‑50 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:4888915/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:1750653/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:3830520/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:3379112/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:205263/1‑49 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:1287256/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:6616818/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:5305571/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:3178987/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:3170067/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:1404536/1‑50 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:1919806/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:3918406/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:981105/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:820674/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:6432592/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:6695633/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:3758055/1‑50 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:396276/50‑1 CTGGATTATTGACCGAATGCGGATCACATTCACATCATTTCTTACGCGCG > 1:5082883/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:2060030/1‑50 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:6077078/1‑49 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:6853711/1‑49 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:5727645/1‑50 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:458944/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:5624453/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:5482067/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGT < 1:4174111/48‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3021556/1‑48 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG < 1:2194522/50‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG < 1:2387285/50‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > 1:2823663/1‑50 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:3011315/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |