| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 119 [0] | [0] 117 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 113 (1.250) | 66/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
Only 100 of 120 total aligned reads displayed.
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:6792754/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:4205140/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:6161414/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA > 1:2032623/1‑49 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT < 1:476455/50‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:4800864/1‑50 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATA < 1:2622185/49‑1 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:4281831/1‑50 AATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT < 1:6602166/50‑1 ATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATT > 1:6505706/1‑49 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:4411474/50‑1 TTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGA < 1:1797585/50‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:5737965/1‑49 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:5386758/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT < 1:761264/49‑1 TAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGAT > 1:1845398/1‑49 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:3990126/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:6298083/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:2691790/50‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:5333364/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:7030939/49‑1 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA < 1:1740080/49‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:6054411/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:50816/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:2321790/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATT < 1:206761/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1674219/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTA < 1:5153864/50‑1 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATGGATTATTA < 1:4281397/50‑1 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:5365204/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG > 1:728950/1‑50 ATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAG < 1:567101/50‑1 CTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA > 1:1430555/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:5640033/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACT < 1:2572885/49‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCA < 1:498119/47‑1 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:2013734/46‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTT < 1:4932546/50‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:5750275/49‑1 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:6179939/1‑49 GCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT < 1:3503562/49‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2193650/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:6052821/50‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:4278283/1‑50 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:2826529/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:5406690/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA > 1:1525156/1‑49 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:6617394/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT > 1:1242341/1‑49 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:4141497/1‑50 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:4201538/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:4424211/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATC < 1:4663682/50‑1 AACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT > 1:3210290/1‑49 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA < 1:6948205/50‑1 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:5790265/1‑50 ACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCA > 1:2840011/1‑50 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:774293/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:521715/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:5975938/50‑1 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:1594503/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT > 1:3527160/1‑50 AAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATT < 1:4785860/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:2413548/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:3051111/50‑1 AATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTG < 1:3229986/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:1220618/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:336292/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:6221041/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGA < 1:1687509/49‑1 GATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA > 1:5264701/1‑49 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:5447415/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATA < 1:1464734/50‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:4393227/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAA < 1:103728/50‑1 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:2095382/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:3445733/50‑1 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:3901186/1‑49 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2240306/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1651081/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:2717085/50‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:6127234/49‑1 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATA < 1:941345/49‑1 GGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGA < 1:4624603/50‑1 GAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGAT > 1:745854/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:6026111/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:3702706/1‑50 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:7091506/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:5165417/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:4302410/50‑1 ATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTT < 1:6715404/50‑1 TTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTA > 1:2991056/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:3052433/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1069501/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:5938512/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:1230523/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:4406870/49‑1 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:234688/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:634076/50‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGT < 1:7007214/49‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |