| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 97 [0] | [0] 99 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 97 (1.030) | 59/98 | 0.0 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509584‑2509679 | gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAca < 1:7070578‑M1/49‑3 (MQ=255)gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAca < 1:1158509‑M1/49‑3 (MQ=255)gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAca < 1:4219046‑M1/49‑3 (MQ=255)gCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAca < 1:2248738‑M1/49‑3 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg < 1:3033970‑M1/50‑5 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg < 1:4978065‑M1/50‑5 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:4929270‑M1/1‑46 (MQ=255) cAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcagg > 1:5626969‑M1/1‑46 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc > 1:6244783‑M1/1‑45 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:3271446‑M1/50‑6 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:5321652‑M1/50‑6 (MQ=255) aaGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggc < 1:5390641‑M1/50‑6 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 1:4513702‑M1/50‑7 (MQ=255) aGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcg < 1:4358109‑M1/50‑7 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggc < 1:3088746‑M1/50‑9 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggc < 1:1026580‑M1/50‑9 (MQ=255) cTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcgg > 1:1705928‑M1/1‑42 (MQ=255) tGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca > 1:401928‑M1/1‑41 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact < 1:334728‑M1/50‑12 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact < 1:6745475‑M1/50‑12 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcac > 1:6508498‑M1/1‑39 (MQ=255) ggCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggca < 1:4656247‑M1/48‑10 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcacta < 1:6582050‑M1/50‑13 (MQ=255) gCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcact > 1:3519691‑M1/1‑38 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcgctaac < 1:2322725‑M1/50‑15 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 1:528289‑M1/1‑36 (MQ=255) aaaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaac > 1:2812003‑M1/1‑36 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:5372180‑M1/1‑35 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:4000763‑M1/1‑35 (MQ=255) aaCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacc > 1:398688‑M1/1‑35 (MQ=255) aCTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaaccc < 1:4200427‑M1/50‑17 (MQ=255) cTAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg < 1:4539607‑M1/50‑18 (MQ=255) tAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:67429‑M1/1‑32 (MQ=255) tAAGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccg > 1:6375277‑M1/1‑32 (MQ=255) aGTATCTGACCCCGCATAAGGGATAGAACAcaggcggcactaacccggac < 1:3196678‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:3904482‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:6332519‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac < 1:4476307‑M1/50‑21 (MQ=255) aGTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggac > 1:2247222‑M1/1‑30 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg < 1:6697332‑M1/50‑22 (MQ=255) gTATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg < 1:5669036‑M1/50‑22 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:5345522‑M1/1‑28 (MQ=255) tATCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:2854232‑M1/1‑28 (MQ=255) tCTGGCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:5394452‑M1/49‑24 (MQ=255) tCTGGCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:4528986‑M1/49‑24 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:4900200‑M1/49‑24 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgta < 1:4438024‑M1/49‑24 (MQ=255) tCTGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacg > 1:4801453‑M1/1‑26 (MQ=255) tGACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagac > 1:5314751‑M1/1‑24 (MQ=255) gACCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtagact > 1:6672000‑M1/1‑23 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtaga < 1:1088899‑M1/47‑26 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtaga < 1:2372402‑M1/47‑26 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtag < 1:3107276‑M1/46‑25 (MQ=255) aCCCCGCATAAGGAATAGAACAcaggcggcactaacccggacgtag < 1:569‑M1/46‑25 (MQ=255) cccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgta > 1:6341984‑M1/1‑20 (MQ=255) cccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgta > 1:3263930‑M1/1‑20 (MQ=255) cccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgta < 1:6075590‑M1/50‑31 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:181167‑M1/1‑19 (MQ=255) ccGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat < 1:5151781‑M1/50‑32 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactagcccggacgtagactgtatt < 1:1028912‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatt < 1:3222977‑M1/50‑33 (MQ=255) cGCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtat > 1:5169136‑M1/1‑18 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:6895668‑M1/50‑34 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:1750775‑M1/1‑17 (MQ=255) gCATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta < 1:5687818‑M1/50‑34 (MQ=255) cATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac < 1:4963455‑M1/50‑35 (MQ=255) cATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:964960‑M1/1‑16 (MQ=255) cATAAGGAATAGAACAcaggcggcactaacccggacgtagactgtatta > 1:110985‑M1/1‑16 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:2355108‑M1/1‑15 (MQ=255) aTAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattac > 1:7077151‑M1/1‑15 (MQ=255) tAAGGAATAGAACAcaggcggcactaacccggacgtagactgtattaca > 1:4622950‑M1/1‑14 (MQ=255) aaGGAATAGAACAcaggcggcactaacccggacgcagactgtattacaa > 1:1740098‑M1/1‑13 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaa < 1:4571708‑M1/50‑39 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgtagactgtattacaa > 1:5105972‑M1/1‑12 (MQ=255) aGGAATAGAACAcaggcggcactaacccggacgaagactgtattacaa > 1:5997362‑M1/1‑12 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:784340‑M1/1‑10 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:6469378‑M1/1‑10 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc < 1:690559‑M1/50‑41 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:7111236‑M1/1‑10 (MQ=255) gAATAGAACAcaggcggcactaacccggacgtagactgtattacaaaagc > 1:5591438‑M1/1‑10 (MQ=255) aaTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcg > 1:6921435‑M1/1‑9 (MQ=255) aaTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcg < 1:2101382‑M1/50‑42 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg > 1:2489387‑M1/1‑8 (MQ=255) aTAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcgg > 1:4489537‑M1/1‑8 (MQ=255) tAGAACAcaggcggcactaacccggacgtagactgtattacaaaagcggc < 1:1539763‑M1/50‑44 (MQ=255) gAACAcaggcggcactaacccggacgtagactgtattacaaaagcggca > 1:4104891‑M1/1‑5 (MQ=255) aaCAcaggcggcactaacccggacgtagactgtattacaaaagcggcaaa < 1:3645623‑M1/50‑47 (MQ=255) acacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaa < 1:5058506‑M1/50‑48 (MQ=255) acacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaa < 1:5726499‑M1/50‑48 (MQ=255) acacaggcggcactaacccggacgtagactgtattacaaaagcggcaaa > 1:3986156‑M1/1‑3 (MQ=255) cacaggcggcactaacccggacgtagactttattacaaaagcggcaaaaa < 1:4619802‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:2369690‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:2944271‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaa < 1:5559784‑M1/50‑49 (MQ=255) cacaggcggcactaacccggacgtagactgtattacaaaagcggcaaa > 1:4263609‑M1/1‑2 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggcaaaaag > 1:4178408‑M1/1‑1 (MQ=255) acaggcggcactaacccggacgtagactgtattacaaaagcggaaaaagc < 1:167623‑M1/50‑50 (MQ=255) | GCAAGCTGGGCAAACTAAGTATCTGACCCCGCATAAGGAATAGAACATGCTCCATCCGCGAGCCAGAACCATGTTGTTATTATCGCTCCCCGCCGT > NC_000913/2509584‑2509679 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |