BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913	3,720,634	Δ1,442 bp	IS150‑mediated	insJ–insK	insJ, insK

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3720634	3722075	1442	103 [0]	[0] 103	insJ–insK	insJ,insK

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3720633	0 (0.000)	101 (1.070)	53/98	0.0	100%	noncoding (1/1443 nt)	IS150	repeat region
*	?	NC_000913	3722076 =	0 (0.000)	101 (1.070)	53/98	0.0	100%	intergenic (+27/+252)	insK/glyS	IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta

Only 100 of 103 total aligned reads displayed.

CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  >  NC_000913/3720584‑3720681

cTATATTTCTGC‑GTATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt                                                  >  1:3590747/1‑49 (MQ=255)

cTATATTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTAt                                                  >  1:447130/1‑49 (MQ=255)

 tataTTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGCGTATaa                                                >  1:6616448‑M1/1‑48 (MQ=255)

  atatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac                                               >  1:6721252‑M1/1‑47 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaact                                              <  1:5400859‑M1/50‑5 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac                                               <  1:2568200‑M1/49‑4 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac                                               <  1:1632182‑M1/49‑4 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaac                                               <  1:501656‑M1/49‑4 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa                                                <  1:1354759‑M1/48‑3 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa                                                <  1:1623296‑M1/48‑3 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa                                                <  1:7019447‑M1/48‑3 (MQ=255)

   tatTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaa                                                <  1:3325380‑M1/48‑3 (MQ=255)

    atTTCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactt                                             >  1:2721727‑M1/1‑45 (MQ=255)

     tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            <  1:2077717‑M1/50‑7 (MQ=255)

     tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            >  1:465348‑M1/1‑44 (MQ=255)

     tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            >  1:414161‑M1/1‑44 (MQ=255)

     tttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            <  1:2953529‑M1/50‑7 (MQ=255)

      ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            >  1:5737968‑M1/1‑43 (MQ=255)

      ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            >  1:1274787‑M1/1‑43 (MQ=255)

      ttCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaacttt                                            >  1:6557726‑M1/1‑43 (MQ=255)

       tCTGC‑GCATTCCCAGCCTCCTGTGTTGATTTCCAACGCGTATaactttga                                          >  1:5979915‑M1/1‑42 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta                                      >  1:3139068‑M1/2‑38 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt                                       <  1:6465887‑M1/48‑12 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt                                       <  1:5142667‑M1/48‑12 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattt                                       <  1:176588‑M1/48‑12 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatt                                        <  1:2212027‑M1/47‑11 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgat                                         <  1:693232‑M1/46‑10 (MQ=255)

            cgcATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgat                                         <  1:5801019‑M1/46‑10 (MQ=255)

             gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat                                     <  1:6239066‑M1/50‑14 (MQ=255)

             gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttat                                     <  1:2534821‑M1/50‑14 (MQ=255)

             gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta                                      >  1:1961865‑M1/1‑37 (MQ=255)

             gCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta                                      >  1:2845182‑M1/1‑37 (MQ=255)

              cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata                                    <  1:3105646‑M1/50‑15 (MQ=255)

              cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata                                    <  1:1064134‑M1/50‑15 (MQ=255)

              cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttata                                    <  1:1843831‑M1/50‑15 (MQ=255)

              cATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgattta                                      >  1:2250189‑M1/1‑36 (MQ=255)

               aTTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatag                                   <  1:1808199‑M1/50‑16 (MQ=255)

                ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt                                  <  1:4722935‑M1/50‑17 (MQ=255)

                ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt                                  <  1:3732701‑M1/50‑17 (MQ=255)

                ttCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt                                  >  1:1150690‑M1/1‑34 (MQ=255)

                 tCCCAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagt                                  >  1:2067553‑M1/1‑33 (MQ=255)

                  cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc                                 <  1:1154610‑M1/49‑18 (MQ=255)

                  cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc                                 <  1:3332429‑M1/49‑18 (MQ=255)

                  cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc                                 <  1:64383‑M1/49‑18 (MQ=255)

                  cccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtc                                 <  1:2299601‑M1/49‑18 (MQ=255)

                   ccAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtca                                <  1:1517666‑M1/49‑19 (MQ=255)

                    cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg                              <  1:3383549‑M1/50‑21 (MQ=255)

                    cAGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcagg                              <  1:5510887‑M1/50‑21 (MQ=255)

                     aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt                             >  1:4984934‑M1/1‑29 (MQ=255)

                     aGCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggt                             >  1:5583025‑M1/1‑29 (MQ=255)

                      gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg                            <  1:3090571‑M1/50‑23 (MQ=255)

                      gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg                            <  1:5183222‑M1/50‑23 (MQ=255)

                      gCCTCCTGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtg                            <  1:4522485‑M1/50‑23 (MQ=255)

                        ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg                          <  1:6405604‑M1/50‑25 (MQ=255)

                        ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg                          >  1:5928048‑M1/1‑26 (MQ=255)

                        ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg                          >  1:5488255‑M1/1‑26 (MQ=255)

                        ctcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggg                          <  1:1049561‑M1/50‑25 (MQ=255)

                         tcctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg                         >  1:2279052‑M1/1‑25 (MQ=255)

                           ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct                       <  1:2212839‑M1/50‑28 (MQ=255)

                           ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggct                       <  1:5091487‑M1/50‑28 (MQ=255)

                           ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc                        <  1:1335529‑M1/49‑27 (MQ=255)

                           ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggc                        <  1:7080128‑M1/49‑27 (MQ=255)

                           ctGTGTTGATTTCCAACGAGTATaactttgatttatagtcaggtgggg                         <  1:5351733‑M1/48‑26 (MQ=255)

                            tgtgTTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctt                      >  1:4750545‑M1/1‑22 (MQ=255)

                              tgtTGATTTCCAACGAGTATacctttgatttatagtcaggtggggctttt                    <  1:4664465‑M1/50‑31 (MQ=255)

                              tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt                    >  1:2060110‑M1/1‑20 (MQ=255)

                              tgtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggctttt                    <  1:2262722‑M1/50‑31 (MQ=255)

                               gtTGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc                   >  1:6866680‑M1/1‑19 (MQ=255)

                                ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct                  <  1:5367447‑M1/50‑33 (MQ=255)

                                ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct                  <  1:878961‑M1/50‑33 (MQ=255)

                                ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttct                  <  1:4913013‑M1/50‑33 (MQ=255)

                                ttGATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttc                   <  1:6807254‑M1/49‑32 (MQ=255)

                                  gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct                >  1:2289114‑M1/1‑16 (MQ=255)

                                  gATTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctct                >  1:4198090‑M1/1‑16 (MQ=255)

                                   aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg               >  1:800571‑M1/1‑15 (MQ=255)

                                   aTTTCCAACGAGTATaactttgatttatagtcaggtggggcttttctctg               <  1:6001144‑M1/50‑36 (MQ=255)

                                    tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt              <  1:6479724‑M1/50‑37 (MQ=255)

                                    tttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgt              <  1:1681999‑M1/50‑37 (MQ=255)

                                     ttCCAACGAGTATaactttgatttatagtcaggtggggcttttctctgtc             >  1:1669091‑M1/1‑13 (MQ=255)

                                       ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg           >  1:4335925‑M1/1‑11 (MQ=255)

                                       ccAACGAGTATaactttgatttatagtcaggtggggcttttctctgtct            <  1:477885‑M1/49‑39 (MQ=255)

                                        cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc          >  1:4067635‑M1/1‑10 (MQ=255)

                                        cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctgc          >  1:3067880‑M1/1‑10 (MQ=255)

                                        cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg           <  1:6815964‑M1/49‑40 (MQ=255)

                                        cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg           <  1:2187616‑M1/49‑40 (MQ=255)

                                        cAACGAGTATaactttgatttatagtcaggtggggcttttctctgtctg           <  1:1427973‑M1/49‑40 (MQ=255)

                                           cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt       <  1:293952‑M1/50‑44 (MQ=255)

                                           cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt       <  1:4248004‑M1/50‑44 (MQ=255)

                                           cGAGTATaactttgatttatagtcaggtggggcttttctctgtctgcctt       >  1:4770347‑M1/1‑7 (MQ=255)

                                            gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt      <  1:2387629‑M1/50‑45 (MQ=255)

                                            gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt      >  1:3252922‑M1/1‑6 (MQ=255)

                                            gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt      <  1:2027940‑M1/50‑45 (MQ=255)

                                            gAGTATaactttgatttatagtcaggtggggcttttctctgtctgccttt      <  1:801002‑M1/50‑45 (MQ=255)

                                             aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc     <  1:2060638‑M1/50‑46 (MQ=255)

                                             aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc     >  1:5621012‑M1/1‑5 (MQ=255)

                                             aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc     >  1:1599062‑M1/1‑5 (MQ=255)

                                             aGTATaactttgatttatagtcaggtggggcttttctctgtctgcctttc     <  1:4877250‑M1/50‑46 (MQ=255)

                                              gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg    <  1:4199442‑M1/50‑47 (MQ=255)

                                              gTATaactttgatttatagtcaggtggggcttttctctgtctgcctttcg    <  1:5407809‑M1/50‑47 (MQ=255)

                                                 taactttgatttatagtcaggtggggcttttctctgtctgcctttcggt  >  1:5880759‑M1/1‑1 (MQ=255)

CTATATTTCTGCGGCATTCCCAGCCTCCTGTGTTGATTTCCAACGAGTATGTACTGCACCCATTTTGTTGGACGATGAAATGGAATAGCCCCTAATAT  >  NC_000913/3720584‑3720681

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`