Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 3,581,139 3915 bp→CAAATG [yhhY]yrhB [yhhY], yhhZ, yrhA, insA‑6, insB‑6, yrhA, yrhD, yrhB

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3581139 3585053 3915 86 [0] [0] 78 [yhhY]–yrhB [yhhY],yhhZ,yrhA,insA‑6,insB‑6,yrhA,yrhD,yrhB

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 35811380 (0.000)73 (0.890)
+CAAATG
45/86 0.0 100% coding (1/489 nt) yhhY N‑acetyltransferase YhhY
?NC_000913 3585054 = 0 (0.000)intergenic (+11/+27) yrhB/ggt putative heat shock chaperone/glutathione hydrolase proenzyme

GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAT  >  NC_000913/3585005‑3585100
                                                 |                                              
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                <  1:4285941‑M2/1‑1 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                <  1:988048‑M2/1‑1 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                >  1:5982466‑M2/50‑50 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                >  1:5807146‑M2/50‑50 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                >  1:4082079‑M2/50‑50 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                >  1:2546286‑M2/50‑50 (MQ=255)
aatgatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgc                                                >  1:1454652‑M2/50‑50 (MQ=255)
 atgacgttgaaagggacatttaccccaaagaggacaaaggaacaaatgct                                               <  1:647783‑M2/2‑1 (MQ=255)
   gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                             >  1:3744264‑M2/47‑50 (MQ=255)
   gatgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                             >  1:6259649‑M2/47‑50 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgctct                                             <  1:3215885‑M2/4‑1 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                            >  1:4199571‑M2/46‑50 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                            <  1:458388‑M2/5‑1 (MQ=255)
    atgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCtt                                            <  1:591119‑M2/5‑1 (MQ=255)
     tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                           <  1:3326212‑M2/6‑1 (MQ=255)
     tgttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTc                                           >  1:3192097‑M2/45‑50 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTccc                                         <  1:6763064‑M2/8‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                          <  1:1995359‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                          <  1:4441787‑M2/7‑1 (MQ=255)
       ttgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTcc                                          >  1:6952234‑M2/43‑49 (MQ=255)
        tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                        >  1:935431‑M2/42‑50 (MQ=255)
        tgaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                        >  1:2258576‑M2/42‑50 (MQ=255)
         gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                        <  1:269469‑M2/9‑1 (MQ=255)
         gaaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCa                                        <  1:5583943‑M2/9‑1 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                       <  1:2849032‑M2/10‑1 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                       >  1:6640966‑M2/40‑49 (MQ=255)
          aaagggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCAc                                       >  1:3368282‑M2/40‑49 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                      >  1:2460461‑M2/38‑48 (MQ=255)
            agggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGaa                                    <  1:3547992‑M2/13‑1 (MQ=255)
             gggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACg                                      >  1:2627275‑M2/37‑47 (MQ=255)
              ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga                                  <  1:603670‑M2/15‑1 (MQ=255)
              ggacatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAaga                                  <  1:4745945‑M2/15‑1 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                >  1:2107520‑M2/34‑50 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                <  1:810044‑M2/17‑1 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                <  1:5582644‑M2/17‑1 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                >  1:6126791‑M2/34‑50 (MQ=255)
                acatttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAgg                                <  1:1991116‑M2/17‑1 (MQ=255)
                 catttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAggg                               >  1:3393162‑M2/33‑50 (MQ=255)
                  atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc                              <  1:3793780‑M2/19‑1 (MQ=255)
                  atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc                              >  1:2359215‑M2/32‑50 (MQ=255)
                  atttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGc                              >  1:3098580‑M2/32‑50 (MQ=255)
                   tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                             <  1:4611028‑M2/20‑1 (MQ=255)
                   tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                             <  1:6107660‑M2/20‑1 (MQ=255)
                   tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                             <  1:6653679‑M2/20‑1 (MQ=255)
                   tttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                             <  1:5412127‑M2/20‑1 (MQ=255)
                   tttaccccaaaaaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGcc                             <  1:5507630‑M2/20‑1 (MQ=255)
                    ttaccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCg                            >  1:6042397‑M2/30‑50 (MQ=255)
                       ccccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTa                         <  1:6076346‑M2/24‑1 (MQ=255)
                        cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                        <  1:1246896‑M2/25‑1 (MQ=255)
                        cccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTaa                        >  1:5617182‑M2/26‑50 (MQ=255)
                         ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc                       >  1:2898722‑M2/25‑50 (MQ=255)
                         ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc                       >  1:4482996‑M2/25‑50 (MQ=255)
                         ccaaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAAc                       >  1:5774261‑M2/25‑50 (MQ=255)
                           aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                     >  1:4946582‑M2/23‑50 (MQ=255)
                           aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                     <  1:2109970‑M2/28‑1 (MQ=255)
                           aaagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                     >  1:4670912‑M2/23‑50 (MQ=255)
                            aagaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCt                     >  1:1422544‑M2/22‑49 (MQ=255)
                             agaggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTa                   <  1:3399463‑M2/30‑1 (MQ=255)
                               aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAg                  >  1:930649‑M2/19‑49 (MQ=255)
                               aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                 <  1:5140547‑M2/32‑1 (MQ=255)
                               aggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGt                 <  1:4278583‑M2/32‑1 (MQ=255)
                                ggacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTa                >  1:6424284‑M2/18‑50 (MQ=255)
                                 gacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAc               <  1:4806651‑M2/34‑1 (MQ=255)
                                 gacaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAc               >  1:3927856‑M2/17‑50 (MQ=255)
                                  acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc              >  1:2319643‑M2/16‑50 (MQ=255)
                                  acaaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcc              >  1:2373630‑M2/16‑50 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc            >  1:776511‑M2/14‑50 (MQ=255)
                                    aaaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTAcccc            >  1:2673280‑M2/14‑50 (MQ=255)
                                     aaggaacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCccg           >  1:5923286‑M2/13‑50 (MQ=255)
                                         aacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt       >  1:6264421‑M2/9‑50 (MQ=255)
                                         aacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt       >  1:3465959‑M2/9‑50 (MQ=255)
                                         aacaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt       >  1:3602818‑M2/9‑50 (MQ=255)
                                          acaaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGt       >  1:6515897‑M2/8‑49 (MQ=255)
                                            aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa     >  1:1983953‑M2/6‑49 (MQ=255)
                                            aaatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTa     >  1:4025783‑M2/6‑49 (MQ=255)
                                             aatgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTaaa   >  1:354492‑M2/5‑50 (MQ=255)
                                               tgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt  >  1:2793802‑M2/3‑49 (MQ=255)
                                               tgCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAt  >  1:1454260‑M2/3‑49 (MQ=255)
                                                 |                                              
GATTACGAAATAAAAAAGGCTACCTTCGGCTTGCCCTGACAAAATAGCCCTCTTCCCACGAAGAGGGCCGCTAACCTTAGTACCCCGCCGTTAAAT  >  NC_000913/3585005‑3585100

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: