| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 185 [0] | [0] 187 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 176 (1.230) | 79/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 188 total aligned reads displayed.
GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC < 2:5391382/50‑1GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCC > 1:5656121/1‑50 CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:4634128/50‑1 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 2:459753/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 2:5190935/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:3713552/1‑50 GTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCAC > 2:5520314/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT < 2:4959755/50‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT < 1:2130469/50‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:2682432/1‑50 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:3357784/49‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGTTCTTTATAGCCCACTTAT < 2:5113411/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 2:2343177/1‑50 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 2:3622174/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:1965389/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:4507660/50‑1 TTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:2314339/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:2956889/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 2:2443460/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC < 2:4799874/50‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:3088020/1‑49 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA < 2:1307021/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA < 1:1422140/49‑1 TACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC > 1:2483723/1‑49 TACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC > 1:3816885/1‑49 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA > 2:845932/1‑50 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 2:3090389/49‑1 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:3216870/49‑1 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:5626082/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 2:4720699/50‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC < 2:4857024/50‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA < 1:373362/49‑1 ACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACT > 2:3897733/1‑50 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT > 2:4216119/1‑50 CTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT < 1:677863/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA < 1:4398000/50‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA < 2:1945112/49‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGA < 1:1155613/49‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 2:2590413/48‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 1:4611280/48‑1 CGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTG < 2:222833/48‑1 CGCTATAGCTTTCTTCAGACCTTTATAGCCCACTTATTTAACAACATGAA < 2:2726156/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:1388418/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:712289/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 2:1726508/50‑1 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 1:5043167/50‑1 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 1:3606545/50‑1 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA > 2:2139450/1‑50 CTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAA < 2:1858158/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 2:4925695/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 2:2113812/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 2:4503168/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:153129/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT < 2:4615389/48‑1 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 2:2272552/1‑50 CTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGT > 1:5220561/1‑50 TTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT > 1:4776111/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:811690/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 2:347129/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG < 1:3029017/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT < 1:632674/49‑1 TTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 2:5346675/1‑49 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC > 1:4017635/1‑50 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 2:1181873/49‑1 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:1231118/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC > 2:1583466/1‑50 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCg < 2:4346704/50‑2 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT > 2:261985/1‑50 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 2:5146005/50‑1 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG > 1:2692311/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:133545/1‑50 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 2:1513357/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG > 1:2894516/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT < 2:2700047/49‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT < 1:1004409/49‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT < 1:4990066/49‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG < 2:4574730/47‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:1796281/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 2:1050994/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:171373/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 2:4979101/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 2:921061/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:1604530/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 2:1026010/39‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:4102789/1‑50 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:5227908/49‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:4686669/49‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:2187175/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 2:3377106/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:4307371/1‑49 AGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 2:3457484/1‑50 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 2:598000/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA < 2:822921/49‑1 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 2:3693836/1‑49 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC > 2:3358773/1‑49 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC > 1:3605997/1‑49 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA < 2:3187351/50‑1 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > 2:4463127/1‑49 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA < 1:2751124/50‑1 CACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA > 1:3141037/1‑49 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |