| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 167,484 | Δ5,964 bp | [fhuA]–fhuB | [fhuA], fhuC, fhuD, fhuB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 167484 | 173447 | 5964 | 207 [0] | [0] 204 | [fhuA]–fhuB | [fhuA],fhuC,fhuD,fhuB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 167483 | 0 (0.000) | 201 (1.350) | 83/98 | 0.0 | 100% | intergenic (+219/‑1) | mrcB/fhuA | peptidoglycan glycosyltransferase/peptidoglycan DD‑transpeptidase MrcB/ferrichrome outer membrane transporter/phage receptor |
| ? | NC_000913 | 173448 = | 0 (0.000) | intergenic (+4/+154) | fhuB/hemL | iron(III) hydroxamate ABC transporter membrane subunit/glutamate‑1‑semialdehyde aminotransferase | |||||
Only 100 of 207 total aligned reads displayed.
ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167434‑167531 | ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 2:775888/1‑50 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:1640030/1‑50 (MQ=255)ataatCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCa > 1:87582/1‑50 (MQ=255) tAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAt < 1:2846577‑M1/50‑2 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:4802997‑M1/1‑47 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:1442782‑M1/1‑47 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc < 1:5287009‑M1/50‑4 (MQ=255) aTCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAtt < 2:1030567‑M1/49‑3 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 1:4717482‑M1/1‑46 (MQ=255) tCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttc > 2:488507‑M1/1‑46 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccat < 2:4251645‑M1/50‑7 (MQ=255) aTTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttcca < 2:3909306‑M1/49‑6 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:1357028‑M1/1‑43 (MQ=255) ttCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccata > 2:4731388‑M1/1‑43 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat > 1:2731628‑M1/1‑41 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat > 2:3441477‑M1/1‑41 (MQ=255) ctcGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatat > 1:4066345‑M1/1‑41 (MQ=255) cGTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac > 2:531070‑M1/1‑39 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 2:3179638‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 2:20453‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg < 1:5630799‑M1/50‑13 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacg > 2:821544‑M1/1‑38 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 2:4570809‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:2024319‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatataac < 1:2869023‑M1/49‑12 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 1:2985791‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTTTACATCAGAGATATACCAttccatata < 2:3645766‑M1/47‑10 (MQ=255) gTTTACGTTATCATTCACTATACATCAGAGATATACCAttccatata < 1:5437114‑M1/47‑10 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 2:565815‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:3435433‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 2:117539‑M1/1‑37 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg < 1:2172545‑M1/50‑14 (MQ=255) tttACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacgg > 1:4400787‑M1/1‑37 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc < 2:123690‑M1/49‑15 (MQ=255) tACGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggc < 1:843591‑M1/49‑15 (MQ=255) aCGTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccc > 1:1982683‑M1/1‑34 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 2:142902‑M1/1‑32 (MQ=255) gTTATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:3718571‑M1/1‑32 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctgt < 1:3628483‑M1/50‑20 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:2592363‑M1/1‑31 (MQ=255) ttATCATTCACTTTACATCAGAGATATACCAttccatataacggccctg > 1:952034‑M1/1‑31 (MQ=255) aTCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac > 2:2821274‑M1/1‑29 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacg < 1:2086260‑M1/50‑23 (MQ=255) tCATTCACTTTACATCAGAGATATACCAttccatataacggccctgtac < 1:689862‑M1/49‑22 (MQ=255) cATTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgc > 2:261169‑M1/1‑27 (MQ=255) aTTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcc > 2:4913010‑M1/1‑26 (MQ=255) aTTCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcc < 1:5100835‑M1/50‑25 (MQ=255) ttCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcct > 2:1446823‑M1/1‑25 (MQ=255) ttCACTTTACATCAGAGATATACCAtaccatataacggccctgtacgcct < 1:4497439‑M1/50‑26 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:5476446‑M1/1‑24 (MQ=255) tCACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:4589559‑M1/1‑24 (MQ=255) cACTTTACATCAGAGATATACCAttccatataacggccctgtacgcctg > 1:147537‑M1/1‑23 (MQ=255) aCTTTACATCAGAGATATACCAttccatataacggccctgtacgcctgga > 1:748843‑M1/1‑22 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac > 2:2091715‑M1/1‑21 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac < 1:1766255‑M1/50‑30 (MQ=255) cTTTACATCAGAGATATACCAttccatataacggccctgtacgcctggac < 1:4964921‑M1/50‑30 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:4600945‑M1/1‑20 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 2:1736553‑M1/1‑20 (MQ=255) tttACATCAGAGATATACCAttccatataacggccctgtacgcctggacg > 1:3320975‑M1/1‑20 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:1879149‑M1/1‑18 (MQ=255) tACATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:2294396‑M1/1‑18 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga < 1:3918101‑M1/49‑33 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:1167283‑M1/1‑17 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 1:2053939‑M1/1‑17 (MQ=255) aCATCAGAGATATACCAttccatataacggccctgtacgcctggacgga > 2:5109974‑M1/1‑17 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggata < 2:5151737‑M1/50‑35 (MQ=255) cATCAGAGATATACCAttccatataacggccctgtacgcctggacggat > 1:3670737‑M1/1‑16 (MQ=255) aTCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:591045‑M1/1‑15 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 1:1220533‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 1:2688949‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggataaa < 2:1935587‑M1/50‑37 (MQ=255) tCAGAGATATACCAttccatataacggccctgtacgcctggacggata > 1:3973764‑M1/1‑14 (MQ=255) agagATATTCCAttccatataacggccctgtacgcctggacggataaag < 2:5610180‑M1/49‑38 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc > 2:3063512‑M1/1‑12 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc > 1:3052383‑M1/1‑12 (MQ=255) agagATATACCAttccatataacggccctgtacgcctggacggataaagc > 2:1542875‑M1/1‑12 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg > 2:5427482‑M1/1‑11 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg > 1:3203310‑M1/1‑11 (MQ=255) gagaTATACCAttccatataacggccctgtacgcctggacggataaagcg < 2:4083254‑M1/50‑40 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt > 1:3496215‑M1/1‑10 (MQ=255) agaTATACCAttccatataacggccctgtacgcctggacggataaagcgt < 2:4716352‑M1/50‑41 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 2:5686878‑M1/1‑9 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt < 2:4872514‑M1/50‑42 (MQ=255) gaTATACCAttccatataacggccctgtacgcctggacggataaagcgtt > 1:5011940‑M1/1‑9 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 2:3767803‑M1/50‑43 (MQ=255) atatACCAttccatataacggccctgtacgcctggacggataaagcgttt < 1:1035695‑M1/50‑43 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta > 2:1696949‑M1/1‑7 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 2:3012529‑M1/50‑44 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta > 1:1530455‑M1/1‑7 (MQ=255) tataCCAttccatataacggccctgtacgcctggacggataaagcgttta < 2:2329607‑M1/50‑44 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:1091284‑M1/1‑6 (MQ=255) ataCCAttccatataacggccctgtacgcctggacggataaagcgtttac > 1:3154927‑M1/1‑6 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttacg < 1:2973794‑M1/50‑46 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 2:5338615‑M1/49‑45 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 1:1719012‑M1/49‑45 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 2:3314546‑M1/49‑45 (MQ=255) taCCAttccatataacggccctgtacgcctggacggataaagcgtttac < 2:2096846‑M1/49‑45 (MQ=255) ccAttccatataacggccctgtacgcctggacggataaagcgtttacgc > 1:5406540‑M1/1‑3 (MQ=255) cAttccatataacggccctgtacgcctggacggataaagcgtttacgcga < 2:690592‑M1/50‑49 (MQ=255) attccatataacggccctgtacgcctggacggataaagcgtttacgcga > 1:5178045‑M1/1‑1 (MQ=255) | ATAATCATTCTCGTTTACGTTATCATTCACTTTACATCAGAGATATACCAATGGCGCGTTCCAAAACTGCTCAGCCAAAACACTCACTGCGTAAAATC > NC_000913/167434‑167531 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |