| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 173 [0] | [0] 180 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 171 (1.150) | 76/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
Only 100 of 180 total aligned reads displayed.
TGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614747‑2614845 | tttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:358707‑M2/50‑50 (MQ=255)tttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 2:1656048‑M2/50‑50 (MQ=255) ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 2:82374‑M2/49‑49 (MQ=255) ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:1213234‑M2/49‑49 (MQ=255) ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:5259150‑M2/49‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:304513‑M2/48‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc < 2:233540‑M2/1‑1 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc < 1:4791360‑M2/1‑1 (MQ=255) atgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccga > 1:3913795‑M2/47‑49 (MQ=255) tgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa < 1:3017338‑M2/5‑1 (MQ=255) gcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:2398265‑M2/45‑49 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 2:3435638‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 1:2999004‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 1:4495892‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:3405538‑M2/7‑1 (MQ=255) aatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAg < 2:4631320‑M2/8‑1 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 2:1575158‑M2/42‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt < 1:437406‑M2/10‑1 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:2078913‑M2/40‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg > 1:3852607‑M2/39‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg > 2:2591566‑M2/39‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 1:4900982‑M2/11‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc < 2:4269509‑M2/11‑1 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:4987135‑M2/38‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 2:12967‑M2/38‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:598930‑M2/38‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:1715901‑M2/38‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:3339910‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc < 1:1110934‑M2/14‑1 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc < 2:635999‑M2/14‑1 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc < 2:418729‑M2/14‑1 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc < 1:5152457‑M2/14‑1 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:427092‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt < 1:1538146‑M2/13‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 2:1821651‑M2/15‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg < 2:445761‑M2/15‑1 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg > 2:4727963‑M2/36‑50 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg < 1:1487270‑M2/16‑1 (MQ=255) tgcaatgtttcatatcattttcaaggagccgacAGAAACAGTTCGTCggg > 1:2336306‑M2/34‑50 (MQ=255) gcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGc > 2:4618239‑M2/33‑50 (MQ=255) caatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt < 1:5462442‑M2/19‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 2:4229434‑M2/20‑1 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 2:1319014‑M2/20‑1 (MQ=255) atgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 2:3534162‑M2/30‑49 (MQ=255) atgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 2:3496361‑M2/30‑49 (MQ=255) tgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGaa < 1:2817570‑M2/22‑1 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 2:309701‑M2/28‑47 (MQ=255) gtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:1777855‑M2/28‑47 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAg < 2:3781338‑M2/23‑1 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat < 2:3993955‑M2/25‑1 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 2:5283597‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:2935644‑M2/26‑1 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 2:3889587‑M2/26‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 2:2587026‑M2/23‑50 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 2:3320561‑M2/23‑50 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt < 2:5159792‑M2/29‑1 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt > 2:4077047‑M2/22‑50 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt > 1:22512‑M2/22‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:3598128‑M2/21‑50 (MQ=255) atcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc > 1:3708451‑M2/21‑50 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTc < 1:1362377‑M2/30‑1 (MQ=255) cattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt > 1:3926212‑M2/19‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt < 2:5597819‑M2/32‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:3443229‑M2/18‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg < 2:4314120‑M2/33‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:1223046‑M2/18‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc > 2:1515666‑M2/17‑50 (MQ=255) ttttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgc < 2:3859004‑M2/34‑1 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 2:212000‑M2/16‑50 (MQ=255) tcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcgc < 2:1188309‑M2/36‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg < 1:5062742‑M2/37‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 2:285358‑M2/13‑50 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGa > 2:5437424‑M2/13‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 2:2026930‑M2/12‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 2:130177‑M2/12‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt > 2:3746706‑M2/12‑50 (MQ=255) aaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAt < 1:4858335‑M2/39‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt < 2:2237638‑M2/40‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt > 2:2167356‑M2/11‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt < 2:2480158‑M2/41‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:4773581‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:3758040‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:2166760‑M2/42‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg < 1:1936239‑M2/42‑1 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc < 1:2460351‑M2/44‑1 (MQ=255) gccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGcc > 2:539943‑M2/7‑50 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa > 1:4113616‑M2/5‑50 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt > 1:4470908‑M2/4‑50 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt > 2:2865553‑M2/4‑50 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:5630342‑M2/48‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:1741514‑M2/48‑1 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc > 2:2229517‑M2/3‑50 (MQ=255) acCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATc < 1:1606114‑M2/48‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:620000‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:231064‑M2/49‑1 (MQ=255) cCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCg < 1:4719203‑M2/49‑1 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg < 1:734947/50‑1 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg < 2:1709196/50‑1 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCgg < 2:5417404/50‑1 (MQ=255) cGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAGTTGCCCATCgg > 1:1019615/1‑50 (MQ=255) | TGTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCGG > NC_000913/2614747‑2614845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |