| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 152 [0] | [0] 155 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 150 (1.000) | 76/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
Only 100 of 152 total aligned reads displayed.
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675503‑675600 | gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa < 1:5221634‑M1/50‑2 (MQ=255)gTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCa > 2:3799079‑M1/1‑49 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat > 1:1221890‑M1/1‑48 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:305972‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:2434766‑M1/50‑3 (MQ=255) tCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCat < 1:5359406‑M1/50‑3 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg > 1:3636969‑M1/1‑47 (MQ=255) cTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg > 2:5174311‑M1/1‑47 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 1:3341303‑M1/1‑45 (MQ=255) gATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 2:1960692‑M1/1‑45 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc < 1:3685895‑M1/49‑6 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggc > 2:5069695‑M1/1‑44 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatgg < 1:4446130‑M1/48‑5 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg < 1:517097‑M1/47‑4 (MQ=255) aTTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatg < 1:2782621‑M1/47‑4 (MQ=255) tttCGCACAGTAATAAAGAGACTATGGTCCGAATGAAATTCCCatggcgc > 2:4701467‑M1/1‑43 (MQ=255) tttCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcga < 1:1974131‑M1/50‑8 (MQ=255) ttCGCACAGCAATAAAGATAATATGGGCCGAATGAAATTCCCatggcgag > 2:2867194‑M1/1‑42 (MQ=255) tCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt > 2:3774950‑M1/1‑41 (MQ=255) tCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt > 2:5581389‑M1/1‑41 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt > 2:897434‑M1/1‑40 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt > 1:4934735‑M1/1‑40 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt > 2:709202‑M1/1‑40 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt < 2:347019‑M1/49‑10 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt < 1:5523837‑M1/49‑10 (MQ=255) cGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagt < 2:815054‑M1/49‑10 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc < 1:175178‑M1/50‑12 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttc > 1:2013928‑M1/1‑39 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt < 2:1656291‑M1/49‑11 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt < 1:823989‑M1/49‑11 (MQ=255) gCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagtt < 1:455821‑M1/49‑11 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 2:653216‑M1/1‑38 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 1:3125837‑M1/50‑13 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct > 2:5618489‑M1/1‑38 (MQ=255) cacaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttct < 2:5404466‑M1/50‑13 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg > 2:3004975‑M1/1‑37 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg < 2:38627‑M1/50‑14 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg < 2:4660950‑M1/50‑14 (MQ=255) acaGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctg > 1:650812‑M1/1‑37 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca > 2:2342188‑M1/1‑35 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca < 1:2950184‑M1/50‑16 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca < 2:2486436‑M1/50‑16 (MQ=255) aGCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgca < 1:4619818‑M1/50‑16 (MQ=255) gCAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat < 2:4157417‑M1/50‑17 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatt < 2:4125132‑M1/50‑18 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatt < 2:160252‑M1/50‑18 (MQ=255) cAATAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcat > 2:2426665‑M1/1‑33 (MQ=255) aaTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcatta < 2:854896‑M1/50‑19 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat > 1:549239‑M1/1‑31 (MQ=255) aTAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattat < 2:218054‑M1/50‑20 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc < 1:2877666‑M1/50‑21 (MQ=255) tAAAGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatc < 1:3885731‑M1/50‑21 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcc < 1:3411114‑M1/49‑22 (MQ=255) aaGAGAATATGGGCCGAATGAAATTCCCatggcgagttctgcattatcc < 2:1918373‑M1/49‑22 (MQ=255) gaATATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattg > 2:2371030‑M1/1‑24 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca < 2:1108697‑M1/50‑28 (MQ=255) aaTATGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgca > 1:349476‑M1/1‑23 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt > 2:1705101‑M1/1‑21 (MQ=255) tatGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcatt < 1:738945‑M1/50‑30 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 2:4225542‑M1/1‑19 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta < 2:1297817‑M1/50‑32 (MQ=255) tGGGCCGAATGAAATTCCCatggcgagttctgcattatccattgcattt < 1:1991073‑M1/49‑31 (MQ=255) gggCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 2:2195330‑M1/1‑18 (MQ=255) gggCCGAATGAAATTCCCatggcgagttctgcattatccattgcattta > 2:846902‑M1/1‑18 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttata > 1:4273918‑M1/1‑17 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttata < 1:1545811‑M1/50‑34 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttat < 1:3035699‑M1/49‑33 (MQ=255) ggCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttat < 1:3119142‑M1/49‑33 (MQ=255) gCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttatat < 2:1885109‑M1/50‑35 (MQ=255) gCCGAATGAAATTCCCatggcgagttctgcattatccattgcatttatat < 1:4586266‑M1/50‑35 (MQ=255) ccGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatc < 1:5087075‑M1/50‑36 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatct < 1:1327932‑M1/50‑37 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatct < 2:1604984‑M1/50‑37 (MQ=255) cGAATGAAATTCCCatggcgagttctgcattatccattgcatttatatct > 2:1265220‑M1/1‑14 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 2:615644‑M1/1‑13 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 2:3617297‑M1/1‑13 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 2:2023030‑M1/1‑13 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt < 2:653365‑M1/50‑38 (MQ=255) gAATGAAATTCCCatggcgagttctgcattatccattgcatttatatctt > 1:2255495‑M1/1‑13 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttg < 2:568164‑M1/50‑39 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttg < 2:5056550‑M1/50‑39 (MQ=255) aaTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttg < 2:3387156‑M1/50‑39 (MQ=255) aTGAAATTCCCatggcgagttctgcattatccattgcatttatatcttga < 2:1103324‑M1/50‑40 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 2:4264852‑M1/50‑41 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 1:666548‑M1/50‑41 (MQ=255) tGAAATTCCCatggcgagttctgcattatccattgcatttatatcttgaa < 2:2640282‑M1/50‑41 (MQ=255) gAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:1798459‑M1/1‑9 (MQ=255) gAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:4591255‑M1/1‑9 (MQ=255) gAAATTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:4011152‑M1/1‑9 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaa < 1:1491654‑M1/49‑42 (MQ=255) aaaTTCCCatggcgagttctgcattatccattgcatttatatcttga > 1:4278711‑M1/1‑8 (MQ=255) aaTTCCCatggcgagttctgcattatccattgcatttatatcttgaaag > 2:3886872‑M1/1‑7 (MQ=255) aTTCCCatggcgagttctgcattatccattgcatttatatcttgaaagaa < 1:1956114‑M1/50‑45 (MQ=255) ttCCCatggcgagttctgcattatccattgcatttatatcttgaaagaaa < 1:4313661‑M1/50‑46 (MQ=255) cccatggcgagttctgcattatccattgcatttatatcttgaaagaaaa < 1:569221‑M1/49‑47 (MQ=255) ccatggcgagttctgcattatccattgcatttatatcttgaaagaaaaag < 2:3016367‑M1/50‑49 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaata < 1:4097245‑M1/50‑50 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaaga < 1:2207617‑M1/50‑50 (MQ=255) catggcgagttctgcattatccattgcatttatatcttgaaagaaaaa > 1:964148‑M1/1‑1 (MQ=255) catggcgagttctgcattatccatggcatttatatcttgaaagaaaaaga < 1:4339804‑M1/50‑50 (MQ=255) | GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCCGGCCCTTGTTTTTATCTCTACAGTAAATCTTCAGTCTCACGAATTTCC > NC_000913/675503‑675600 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |