Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913	3423691–3424234	3428528–3424653	420–4838	65 [62]	[61] 74	[rrfD]–[rrsD]	[rrfD],rrlD,alaU,ileU,[rrsD]

CACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGA  >  NC_000913/3428506‑3428578                        |                                                  caccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAg                         <  2:4488042/50‑1 (MQ=32) caccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAg                         <  2:4104880/50‑1 (MQ=32)  cccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAgg                        <  2:3527652/49‑1 (MQ=25)  accaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAgg                        <  2:3509177/50‑1 (MQ=35)  accaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAgg                        >  1:3928377/1‑50 (MQ=35)  accaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAgg                        >  1:2390992/1‑50 (MQ=35)   ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAggg                       >  2:4971536/1‑50 (MQ=38)   ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAggg                       >  2:2767057/1‑50 (MQ=38)   ccaACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAggg                       <  1:2181284/50‑1 (MQ=38)    caacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGt                      >  2:4301504/1‑50 (MQ=38)    caacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGt                      >  1:1873324/1‑50 (MQ=38)    caacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGCCCCGAGGGt                      >  1:91249/1‑50 (MQ=255)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGTCCCGAGGGTc                     >  1:4308596/1‑50 (MQ=255)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTc                     <  2:5550139/50‑1 (MQ=38)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTc                     >  2:3611231/1‑50 (MQ=38)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTc                     >  1:820923/1‑50 (MQ=38)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTc                     <  2:624529/50‑1 (MQ=38)     aacaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTc                     >  1:5434566/1‑50 (MQ=38)      acaaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTcc                    >  2:1517707/1‑50 (MQ=38)       caaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccc                   <  1:1087789/50‑1 (MQ=38)       caaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccc                   >  1:2165584/1‑50 (MQ=38)       caaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccc                   >  1:4179249/1‑50 (MQ=38)        aaGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTcccc                  >  2:1444737/1‑50 (MQ=38)        aaGCTAATCCCATCTGGACACATCCGATGGCAAGAGGCCCGAGGGTcccc                  >  1:3087558/1‑50 (MQ=255)         aGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccccc                 <  1:1049990/50‑1 (MQ=38)         aGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccccc                 >  1:1507728/1‑50 (MQ=38)         aGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccccc                 >  2:3104137/1‑50 (MQ=38)         aGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccccc                 >  2:1298399/1‑50 (MQ=38)         aGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTccccc                 >  1:3221755/1‑50 (MQ=38)          gCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCct                >  2:4402205/1‑50 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               >  1:2893768/1‑50 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               <  2:3453339/50‑1 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               <  1:3033908/50‑1 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               <  2:1334171/50‑1 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               <  2:2700350/50‑1 (MQ=38)           cTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctc               >  1:2204849/1‑50 (MQ=38)            tAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctct              >  1:4647125/1‑50 (MQ=38)            tAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctct              >  2:665086/1‑50 (MQ=38)            tAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctct              >  1:3017541/1‑50 (MQ=38)            tAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCctct              >  1:4178988/1‑50 (MQ=38)             aaTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCtt             >  1:3999493/1‑50 (MQ=38)             aaTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCtt             >  1:1406911/1‑50 (MQ=38)              aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCttt            <  1:4893105/50‑1 (MQ=38)              aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCttt            >  2:646680/1‑50 (MQ=38)              aTCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCtt             <  2:4280476/49‑1 (MQ=38)               tCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTg           <  2:4139280/50‑1 (MQ=38)               tCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTg           <  1:1991371/50‑1 (MQ=38)               tCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTg           >  1:3692345/1‑50 (MQ=38)                cccATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTgg          >  1:4641339/1‑50 (MQ=38)                 ccATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGt         >  2:644029/1‑50 (MQ=38)                 ccATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGt         <  2:3816012/50‑1 (MQ=38)                  cATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTc        >  2:1808088/1‑50 (MQ=38)                     cTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTg     >  1:1373619/1‑50 (MQ=38)                     cTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTg     >  1:3585548/1‑50 (MQ=38)                      tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  2:2506848/1‑50 (MQ=38)                      tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  2:604143/1‑50 (MQ=38)                      tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  1:3978391/1‑50 (MQ=38)                      tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  1:4428276/1‑50 (MQ=38)                      tGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  1:4042126/1‑50 (MQ=38)                       gggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  1:908969/1‑49 (MQ=38)                       gggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    >  1:3783436/1‑49 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCtt      <  1:4029762/46‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCtt      <  1:3669425/46‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCtt      <  1:4060386/46‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTg     <  1:3707751/47‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTg     <  1:4945844/47‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    <  1:1058588/48‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    <  1:2997041/48‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGc    <  1:1212615/48‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCg   <  2:2124940/49‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCg   <  1:774398/49‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGa  >  1:3557728/1‑50 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGa  <  2:680616/50‑1 (MQ=38)                        ggCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTAGCGa  <  2:369857/50‑1 (MQ=255)                        |                                                  CACCAACAAGCTAATCCCATCTGGGCACATCCGATGGCAAGAGGCCCGAGGGTCCCCCTCTTTGGTCTTGCGA  >  NC_000913/3428506‑3428578

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑