| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 30 [0] | [0] 31 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 30 (1.000) | 28/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA > NC_000913/683371‑683416 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA < 1:1175762/50‑1GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:1560602/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT < 1:811387/50‑1 GATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1428347/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:416508/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGC > 1:1333666/1‑49 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGG < 1:978842/48‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:1843318/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT < 1:368631/49‑1 CAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:398036/1‑49 AGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCA < 1:1626954/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA > 1:1626946/1‑50 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT > 1:490301/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:1385487/1‑50 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:927763/50‑1 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT < 1:17725/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:1816152/1‑50 GCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATAT < 1:1048620/50‑1 CGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCT > 1:1806828/1‑50 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:1649620/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTG < 1:72189/50‑1 AATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:1606049/1‑49 ATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA < 1:1031180/50‑1 GAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:1270562/1‑48 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:1327814/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:535954/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAG > 1:1550103/1‑49 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:1593462/50‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:1749422/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:317226/1‑48 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA > NC_000913/683371‑683416 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |