Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,509,562 Δ46,201 bp [hicB]–maeA 43 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1509562 1555762 46201 30 [0] [0] 30 [hicB]–maeA [hicB],ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,rhsE,ydcD,yncO,yncI,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddJ,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 15095610 (0.000)29 (0.970) 27/98 0.0 100% coding (54/417 nt) hicB antitoxin of the HicA‑HicB toxin‑antitoxin system
?NC_000913 1555763 = 0 (0.000)intergenic (‑94/+63) maeA/sra malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22

TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1509513‑1509561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  NC_000913/1555763‑1555811
                                                                                                  
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTA                                                  <  1:1978071/50‑1
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTA                                                  <  1:1799907/50‑1
 TATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTA                                                  >  1:1297983/1‑49
  ATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAA                                                >  1:717005/1‑50
  ATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAA                                                 <  1:143316/49‑1
   TCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAAC                                               <  1:2187137/50‑1
     CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA                                              <  1:1979639/49‑1
     CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA                                              >  1:1689858/1‑49
        TCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAA                                          >  1:1378553/1‑50
          ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAAC                                         <  1:132596/49‑1
           CTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACAC                                       >  1:1187212/1‑50
                ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTG                                  >  1:1598297/1‑50
                ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCAT                                    <  1:525766/48‑1
                ACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCA                                     <  1:149440/47‑1
                 CACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTG                                  <  1:2223972/49‑1
                  ACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG                                >  1:417976/1‑50
                     CGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAG                             >  1:1200488/1‑50
                        GCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCA                          <  1:1092045/50‑1
                               GGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGT                   <  1:1576870/50‑1
                                 CGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTT                  >  1:578530/1‑49
                                   GTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAA               <  1:584962/50‑1
                                    TTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAAT              <  1:1269521/50‑1
                                       TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT           >  1:549061/1‑50
                                        ATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT           >  1:629251/1‑49
                                           GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT       >  1:359235/1‑50
                                            TTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT       >  1:966033/1‑49
                                              TCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG    >  1:1755312/1‑50
                                                TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  1:2093827/1‑50
                                                TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  1:1285055/1‑50
                                                                                                  
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1509513‑1509561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  NC_000913/1555763‑1555811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.