Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,165,151 Δ12,060 bp yegP–gatY 17 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2165151 2177210 12060 36 [0] [0] 38 yegP–gatY yegP,yegQ,cyaR,ogrK,yegZ,yegR,yegS,gatR,insE‑5,insF‑5,gatR,gatD,gatC,gatB,gatA,gatZ,gatY

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 21651500 (0.000)36 (1.200) 29/98 0.0 100% intergenic (+152/‑39) baeR/yegP DNA‑binding transcriptional activator BaeR/DUF1508 domain‑containing protein YegP
?NC_000913 2177211 = 0 (0.000)intergenic (‑7/+301) gatY/fbaB tagatose‑1,6‑bisphosphate aldolase 2 subunit GatY/fructose‑bisphosphate aldolase class I

GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2165104‑2165150
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT  >  NC_000913/2177211‑2177259
                                                                                                
GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATC                                                <  1:1366549/50‑1
  ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT                                              <  1:1085132/50‑1
  ATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCT                                              <  1:1686548/50‑1
     AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC                                           >  1:277018/1‑50
     AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC                                           <  1:663643/50‑1
     AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC                                           >  1:1835169/1‑50
     AGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTC                                           >  1:1699180/1‑50
      GAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCG                                          <  1:39697/50‑1
       AAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGT                                         >  1:633670/1‑50
        AAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTT                                        >  1:614699/1‑50
         AATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTT                                       <  1:1631677/50‑1
             GCTCATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTT                                   >  1:2079483/1‑50
                 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGA                               <  1:673656/50‑1
                 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCG                                <  1:1605706/49‑1
                 ATACTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTC                                 <  1:315444/48‑1
                    CTTTAATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATT                             <  1:358691/49‑1
                        AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA                         >  1:2216787/1‑49
                        AATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAA                         <  1:1027488/49‑1
                         ATCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAA                        <  1:651129/49‑1
                          TCGGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAAT                      <  1:1177596/50‑1
                            GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT                    <  1:203829/50‑1
                            GGTAAACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATAT                    <  1:1958751/50‑1
                                AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT                 <  1:1240440/49‑1
                                AACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAAT                 >  1:450940/1‑49
                                 ACAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA               <  1:481014/50‑1
                                  CAGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGA               >  1:2861/1‑49
                                   AGCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAA             >  1:1879168/1‑50
                                    GCACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAAT            <  1:1461997/50‑1
                                     CACCTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATT           <  1:2218649/50‑1
                                        CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT        <  1:589892/50‑1
                                        CTTTAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATT        <  1:1966434/50‑1
                                           TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT       <  1:547661/48‑1
                                           TAGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTT       <  1:727080/48‑1
                                            AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT    >  1:1492507/1‑50
                                            AGAATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTT    >  1:1517609/1‑50
                                              AATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT  >  1:44110/1‑50
                                                                                                
GCATCAGAAAATCGCTCATACTTTAATCGGTAAACAGCACCTTTAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2165104‑2165150
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTT  >  NC_000913/2177211‑2177259

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.