| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 27 [0] | [0] 27 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 27 (0.900) | 23/98 | 0.1 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:464367/1‑50 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:1839289/48‑1 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:591275/1‑49 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACA < 1:1007249/50‑1 AATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAG > 1:1625410/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG < 1:52930/50‑1 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC < 1:1625013/50‑1 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG < 1:1126837/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG < 1:575368/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:597289/1‑49 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1572358/1‑47 GTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:1912838/1‑47 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGA < 1:2152681/50‑1 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAG < 1:1833421/49‑1 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:1802876/49‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:332946/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:825264/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:2055916/1‑50 TTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG < 1:341527/49‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:1488907/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGGTGAAGATTATTCTTGCGCGATTT < 1:588307/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:282005/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:1897149/50‑1 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC > 1:1172270/1‑50 AGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGC > 1:1135825/1‑50 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:745034/50‑1 CCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG < 1:948233/50‑1 TTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601152‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCATCG > NC_000913/2614796‑2614844 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |