| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,626,183 | (GCG)3→2 | coding (272‑274/1383 nt) | radA → | DNA recombination protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4626176 | 4626178 | 3 | 25 [0] | [0] 26 | radA | DNA recombination protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4626179 = | 0 (0.000) | 24 (0.940) | 22/84 | 0.0 | 100% | coding (268/1383 nt) | radA | DNA recombination protein |
| ? | NC_000913 | = 4626175 | 0 (0.000) | coding (264/1383 nt) | radA | DNA recombination protein | |||||
TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:1935129/49‑1 CCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGC > 1:795161/1‑50 CCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCG > 1:2083582/1‑50 CGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGC > 1:423686/1‑50 GCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC < 1:1198664/50‑1 ACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTA < 1:2009688/50‑1 AGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTA < 1:1243847/50‑1 GGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTAC > 1:638159/1‑50 GGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACG > 1:527867/1‑50 TTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCG < 1:472817/50‑1 CCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGT < 1:2145087/49‑1 GCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCG > 1:1872862/1‑49 CCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAA > 1:917382/1‑50 AATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACT < 1:261078/50‑1 AATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACT > 1:783523/1‑50 ATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTC < 1:365925/50‑1 TCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCT > 1:1435858/1‑50 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTT < 1:1366021/50‑1 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTT > 1:752072/1‑49 GAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTA < 1:1219134/50‑1 GAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTA < 1:1647223/50‑1 AATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAA < 1:2000361/50‑1 TGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAAT < 1:1033690/50‑1 TGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAAT < 1:2152048/50‑1 GGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATC > 1:317790/1‑50 GCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCC < 1:1854323/50‑1 TGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAA > 1:2029829/1‑49 GGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA > 1:1826794/1‑49 GCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAA < 1:69291/48‑1 CTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT > 1:420611/1‑50 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |