| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 38 [0] | [0] 36 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 33 (1.150) | 27/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 | aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:489063‑M1/50‑1 (MQ=255)aaaaGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:1161151‑M1/50‑1 (MQ=255) aGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAACACATTGAAcgt > 1:1859350‑M1/1‑47 (MQ=255) gCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtct < 1:152676‑M1/50‑6 (MQ=255) aaCTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctac < 1:119853‑M1/50‑8 (MQ=255) ggTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacact > 1:2138943‑M1/1‑39 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactt < 1:1695975‑M1/49‑12 (MQ=255) gTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacactt < 1:1662019‑M1/49‑12 (MQ=255) tGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttac < 1:347054‑M1/50‑14 (MQ=255) aTTTTTATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactc > 1:1426788‑M1/1‑35 (MQ=255) ttttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct > 1:224596‑M1/1‑33 (MQ=255) tttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcct < 1:1554798‑M1/49‑18 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:1799192‑M1/1‑31 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:962075‑M1/1‑31 (MQ=255) ttATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctg > 1:1007535‑M1/1‑31 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt < 1:1005308‑M1/49‑20 (MQ=255) tATTGATTGCTGAGTTTTGAATACATTGAAcgtctacacttactcctgt < 1:733978‑M1/49‑20 (MQ=255) tgattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaac > 1:493143‑M1/1‑27 (MQ=255) gattgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaacc > 1:223303‑M1/1‑26 (MQ=255) attgCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccg > 1:1337400‑M1/1‑25 (MQ=255) gCTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgct > 1:2170403‑M1/1‑22 (MQ=255) cTGAGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctca < 1:1413336‑M1/50‑30 (MQ=255) aGTTTTGAATACATTGAAcgtctacacttactcctgtaaaccgctcag < 1:1814632‑M1/48‑31 (MQ=255) tGAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcag > 1:466035‑M1/1‑13 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:47071‑M1/1‑12 (MQ=255) gAATACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagt > 1:1012958‑M1/1‑12 (MQ=255) aaTACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaa < 1:1287706‑M1/50‑40 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg < 1:1608978‑M1/50‑42 (MQ=255) tACATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaat > 1:1127380‑M1/1‑9 (MQ=255) aCATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg > 1:1302320‑M1/1‑8 (MQ=255) aCATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatg > 1:922856‑M1/1‑8 (MQ=255) cATTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatga < 1:1660898‑M1/49‑43 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat < 1:100192‑M1/50‑45 (MQ=255) aTTGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaat > 1:934184‑M1/1‑6 (MQ=255) tGAAcgtctacacttactcctgtaaaccgctcaggagcagtaatgaatc > 1:770175‑M1/1‑4 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctac < 1:2137447‑M1/50‑49 (MQ=255) aacgtctacacttactcctgtaaaccgctcaggagcagtaatgaatcta < 1:764644‑M1/49‑48 (MQ=255) acgtctacacttactcctgtaaaccgctcaggagcagtaatgaatctaca < 1:1719615‑M1/50‑50 (MQ=255) | AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAAACCGCCAGCGGAAACGCTGGCGGTTTTTTGTATCAGGAAGATGTTCAG > NC_000913/729315‑729413 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |