| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,240,439 | C→T | V60V (GTC→GTT) D545N (GAC→AAC) |
ymgM → cvrA ← |
protein YmgM putative K(+):H(+) antiporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,240,439 | 0 | C | T | 100.0% | 107.1 / NA | 28 | V60V (GTC→GTT) D545N (GAC→AAC) | ymgM cvrA | protein YmgM putative K(+):H(+) antiporter |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (15/13); total (15/13) | |||||||||||
TCTTTCTCGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTCACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAATTTCACC > NC_000913/1240393‑1240484 | tctttctCGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTAcc > 1:1470081/1‑50 (MQ=255) ctttctCGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTAcc < 1:1182408/49‑1 (MQ=255) tttctCGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGa > 1:914285/1‑50 (MQ=255) tctcGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGAc < 1:892792/49‑1 (MQ=255) gCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCgg > 1:645483/1‑50 (MQ=255) ccACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGt < 1:1920101/50‑1 (MQ=255) ccACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGt < 1:389919/50‑1 (MQ=255) cACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTg > 1:959413/1‑50 (MQ=255) cACCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTg > 1:1911244/1‑50 (MQ=255) aCCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTGc > 1:1441735/1‑50 (MQ=255) aCCGTCCAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTGc > 1:555405/1‑50 (MQ=255) ccAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCgcgc > 1:172295/1‑50 (MQ=255) ccAGATCATCCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCgcgc > 1:367353/1‑50 (MQ=255) atcatcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaa > 1:380874/1‑50 (MQ=255) atcatcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaa < 1:418186/50‑1 (MQ=255) atcatcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaa < 1:1852522/50‑1 (MQ=255) tcatcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaac < 1:2014569/50‑1 (MQ=255) tcatcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaa > 1:358427/1‑49 (MQ=255) atcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaacaa < 1:842617/50‑1 (MQ=255) atcCCGGCAAACTCTACCTGGTTACCGACAACCGGTGCCGCGCCTaaca < 1:2010704/49‑1 (MQ=255) aCTCTACCTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGAc > 1:391163/1‑49 (MQ=255) tctACCTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAAt > 1:650821/1‑50 (MQ=255) tACCTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAAt < 1:556238/48‑1 (MQ=255) aCCTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAAttt > 1:1147684/1‑49 (MQ=255) ccTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAAttt < 1:898672/48‑1 (MQ=255) ccTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAATTTc < 1:1095224/49‑1 (MQ=255) ccTGGTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAATTTc < 1:827465/49‑1 (MQ=255) ggTTACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAATTTCAcc > 1:1221540/1‑49 (MQ=255) | TCTTTCTCGGCCACCGTCCAGATCATCCCGGCAAACTCTACCTGGTCACCGACAACCGGTGCCGCGCCTAACAACTGCTGGACAATTTCACC > NC_000913/1240393‑1240484 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |