| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 58 [0] | [0] 60 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 57 (1.520) | 44/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:1855932/49‑1AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG > 1:113015/1‑49AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:289264/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA < 1:513768/50‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAAT < 1:1544381/50‑1 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:651271/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:1095217/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:326087/1‑50 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:2764516/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT < 1:779534/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:1535017/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATAT > 1:1400913/1‑49 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:470666/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:2528974/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG < 1:1964194/50‑1 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:957389/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC > 1:48322/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:2067505/1‑50 TAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGT > 1:2658116/1‑50 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:2314743/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:1580708/49‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT > 1:2143321/1‑49 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTT < 1:703903/49‑1 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:1536856/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:916323/49‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:2012600/49‑1 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:1547854/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:1963426/1‑49 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA < 1:787250/49‑1 TATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAA > 1:579721/1‑49 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:767105/1‑50 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA < 1:1163374/49‑1 ATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:1609621/1‑49 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA < 1:2426813/50‑1 CACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTAC < 1:125279/49‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 1:248891/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT < 1:2088600/50‑1 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:358218/1‑50 TGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG > 1:2002078/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTG < 1:2579656/48‑1 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG > 1:2459385/1‑50 AAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGG < 1:518879/50‑1 AATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGT > 1:2092347/1‑50 ATATTTTTAATCTTGAATATTATCGTGCGTTAAAATATTACATTGTGGTT > 1:1068695/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:2420496/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:2432890/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:1063827/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:2296574/1‑49 TTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC > 1:569875/1‑49 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG > 1:1027203/1‑50 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:1516077/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATG < 1:1420271/49‑1 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:370971/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:2710165/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG > 1:2639804/1‑50 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:1241431/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:555311/1‑49 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |