| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 603,467 | Δ5,885 bp | [ybdG]–insL‑2 | [ybdG], nfsB, ybdF, ybdJ, ybdK, sokE, hokE, insL‑2 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 603467 | 609351 | 5885 | 42 [0] | [0] 45 | [ybdG]–insL‑2 | [ybdG],nfsB,ybdF,ybdJ,ybdK,sokE,hokE,insL‑2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 603466 | 0 (0.000) | 39 (1.090) | 37/94 | 0.0 | 100% | coding (1198/1248 nt) | ybdG | miniconductance mechanosensitive channel YbdG |
| ? | NC_000913 | 609352 = | 0 (0.000) | intergenic (+175/+107) | insL‑2/entD | IS186/IS421 transposase/phosphopantetheinyl transferase EntD | |||||
ACTGCTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/603418‑603466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCT > NC_000913/609352‑609400 ACTGCTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAG > 1:1060963/1‑50 CTGCTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGT < 1:2096839/50‑1 GCTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAA > 1:1508233/1‑50 CTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAAT > 1:1018727/1‑50 TAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCC > 1:1571390/1‑50 AAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATTCC > 1:1689921/1‑50 AAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATC < 1:205583/48‑1 AATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCC > 1:442547/1‑50 AATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCC > 1:2809109/1‑50 CACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCAT < 1:2258936/50‑1 ACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATA < 1:2467672/50‑1 ACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATA > 1:82838/1‑50 CGCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCC < 1:729768/50‑1 GCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCG < 1:547229/50‑1 GCCAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCG > 1:2208618/1‑50 CAGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGT > 1:68965/1‑50 AGAGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTT < 1:764274/50‑1 AGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGT > 1:1854603/1‑50 AGAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGT < 1:1156708/50‑1 GAGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGT > 1:138977/1‑49 AGCGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCA < 1:2089297/50‑1 CGAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGG > 1:1086485/1‑50 GAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGT > 1:790781/1‑50 GAATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGT > 1:1259956/1‑50 ATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCA < 1:965040/50‑1 ATATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGT > 1:104241/1‑48 TATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAG < 1:18877/50‑1 ATCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAG > 1:1313064/1‑49 TCATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGA > 1:1460918/1‑50 CATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAT > 1:479527/1‑50 ATTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAT < 1:2138636/49‑1 TTGCCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGG < 1:2181285/50‑1 CCGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTA < 1:2747106/49‑1 CGGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAG > 1:1875621/1‑50 GGTTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGG > 1:115050/1‑50 TTGGCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCA > 1:693807/1‑50 GGCGAGTAATCCCAGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACC > 1:1992790/1‑50 GCGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCT > 1:2555861/1‑50 CGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTG > 1:1001166/1‑50 GAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGC < 1:1959817/50‑1 AGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCT > 1:408815/1‑50 AGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCT > 1:965442/1‑50 ACTGCTTAAATGCACCCGCCAGAGAGCGAATATCATTGCCGGTTGGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/603418‑603466‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGCT > NC_000913/609352‑609400 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |