| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 47 [0] | [0] 48 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 47 (1.260) | 37/98 | 0.0 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:501125/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:1892429/1‑50 TCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCAT > 1:1482565/1‑50 ATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATG < 1:2670853/47‑1 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGT > 1:2516435/1‑50 CGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTT > 1:2782732/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:1144757/50‑1 CACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCT > 1:191533/1‑50 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:13697/1‑50 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG < 1:1746209/50‑1 ACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTG > 1:1572211/1‑50 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:1246978/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT > 1:1478037/1‑50 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:1290825/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:1620473/1‑50 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:2790176/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT > 1:1505013/1‑50 GAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATT < 1:1289976/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:2612685/1‑50 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG > 1:768508/1‑50 ATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCAT > 1:757208/1‑50 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:1841618/1‑50 TATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:204460/1‑50 ATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:2105507/1‑49 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA > 1:1437063/1‑50 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:1005027/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:655632/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA > 1:2267213/1‑50 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATA < 1:1258378/50‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:643389/49‑1 GGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTAT < 1:629485/49‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:1995183/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:2410022/50‑1 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:817055/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC > 1:908160/1‑50 CCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATC < 1:273234/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT < 1:1111417/50‑1 GAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTT > 1:343007/1‑50 TGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAA < 1:1286611/50‑1 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:1692936/50‑1 ATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAA < 1:1148190/50‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:2556747/1‑49 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:2211783/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:1250789/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:1925194/1‑48 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:1820758/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:841493/50‑1 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |