Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,627,518 Δ25,244 bp [ydfG]–[ynfP] 48 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1627518 1652761 25244 34 [0] [0] 34 [ydfG]–[ynfP] [ydfG],ydfH,ydfZ,ydfI,ydfJ,ynfT,ydfK,pinQ,tfaQ,ydfN,nohA,ynfO,ydfO,gnsB,ynfN,ynfR,ynfQ,cspI,rzpQ,rzoQ,rrrQ,ydfR,essQ,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,dicC,dicA,ydfA,ydfB,ydfC,dicF,dicB,ydfD,ydfE,insD‑7,intQ,[ynfP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16275170 (0.000)33 (0.900) 27/96 0.1 100% coding (1/747 nt) ydfG 3‑hydroxy acid dehydrogenase
?NC_000913 1652762 = 0 (0.000)coding (77/111 nt) ynfP protein YnfP

GCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627468‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTA  >  NC_000913/1652762‑1652809
                                                                                                  
GCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA                                                  <  1:2115016/50‑1
  ATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAG                                                <  1:1776940/50‑1
   TCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGC                                               >  1:2387528/1‑50
    CCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                              >  1:1307046/1‑50
    CCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                              >  1:1842113/1‑50
     CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                              >  1:1177777/1‑49
     CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                              >  1:696509/1‑49
          CTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGC                                        >  1:2690334/1‑50
            ATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCC                                       >  1:1573531/1‑49
              GTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAG                                    >  1:2669073/1‑50
                 ATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCC                                  <  1:1537936/49‑1
                  TTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCAT                                >  1:908628/1‑50
                   TGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATC                               >  1:1056398/1‑50
                     ACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCC                             <  1:1620026/50‑1
                     ACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCC                             <  1:140167/50‑1
                      CACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCG                            <  1:2484853/50‑1
                       ACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGA                           >  1:1728524/1‑50
                       ACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGA                           >  1:2488738/1‑50
                        CACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGAT                          <  1:1622088/50‑1
                          CAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATAC                        <  1:915951/50‑1
                             AAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGC                     >  1:2464353/1‑50
                              AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                    <  1:997674/50‑1
                              AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                    >  1:393474/1‑50
                              AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                    <  1:2364626/50‑1
                               GCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTG                   <  1:396906/50‑1
                                 GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCT                 <  1:500067/50‑1
                                   TGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTT               >  1:2584117/1‑50
                                   TGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTT               >  1:2237609/1‑50
                                    GAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTT               <  1:464328/49‑1
                                           AGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAAT       >  1:1784096/1‑50
                                            GTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATC      >  1:2739118/1‑50
                                             TGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCC     >  1:907696/1‑50
                                               AGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTT   <  1:1871495/50‑1
                                                GAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTA  <  1:1634720/50‑1
                                                                                                  
GCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627468‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCTTA  >  NC_000913/1652762‑1652809

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.