Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,204,350 Δ32,368 bp yehL–preA 30 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2204350 2236717 32368 42 [0] [0] 41 yehL–preA yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22043490 (0.000)41 (1.100) 34/98 0.0 100% intergenic (+60/‑247) yehK/yehL uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL
?NC_000913 2236718 = 0 (0.000)intergenic (+218/+25) preA/mglC NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit

AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2204302‑2204349
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA  >  NC_000913/2236718‑2236765
                                                                                                
AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT                                                 >  1:1885835/1‑49
     AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA                                           <  1:2089025/50‑1
     AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG                                            >  1:1443150/1‑49
      AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA                                          >  1:2762318/1‑50
       ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT                                         <  1:370577/50‑1
       ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT                                         >  1:2168439/1‑50
       ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT                                         >  1:1485081/1‑50
       ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT                                         >  1:792075/1‑50
       ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT                                         >  1:570775/1‑50
          GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG                                      >  1:572917/1‑50
          GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG                                      >  1:2660032/1‑50
          GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC                                       <  1:1878181/49‑1
           GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG                                      >  1:2521521/1‑49
             CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC                                   >  1:1907046/1‑50
              CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC                                  <  1:2724891/50‑1
               GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA                                 >  1:567713/1‑50
                 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA                               <  1:2165549/50‑1
                 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA                               >  1:1353025/1‑50
                   CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT                             <  1:108048/50‑1
                   CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACAT                              <  1:1066051/49‑1
                    GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT                             >  1:351124/1‑49
                       GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA                         <  1:332191/50‑1
                         AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT                        >  1:845805/1‑49
                         AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT                        >  1:289932/1‑49
                          ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA                      <  1:1844294/50‑1
                          ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCA                      <  1:936196/50‑1
                            GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT                    >  1:1831783/1‑50
                            GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT                    <  1:912811/50‑1
                            GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT                    <  1:452767/50‑1
                              CCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC                  >  1:834226/1‑50
                                 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA               >  1:2414866/1‑50
                                  ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC              <  1:1309872/50‑1
                                   TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG             <  1:2627909/50‑1
                                   TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG             >  1:1391339/1‑50
                                    GGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC            >  1:1829266/1‑50
                                     GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG           <  1:2050820/50‑1
                                      CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC          >  1:722094/1‑50
                                          GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT      <  1:2274681/50‑1
                                           ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT     >  1:945850/1‑50
                                              ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC   <  1:2366024/49‑1
                                               TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA  <  1:1887522/49‑1
                                                                                                
AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2204302‑2204349
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA  >  NC_000913/2236718‑2236765

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.