| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 4,626,183 | (GCG)3→2 | coding (272‑274/1383 nt) | radA → | DNA recombination protein |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 4626176 | 4626178 | 3 | 16 [0] | [0] 17 | radA | DNA recombination protein |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4626179 = | 0 (0.000) | 13 (0.410) | 13/84 | 0.8 | 100% | coding (268/1383 nt) | radA | DNA recombination protein |
| ? | NC_000913 | = 4626175 | 0 (0.000) | coding (264/1383 nt) | radA | DNA recombination protein | |||||
TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCAC < 1:687606/49‑1 CCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCC < 1:507554/50‑1 CACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCT < 1:951181/50‑1 CACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC > 1:2738279/1‑49 ACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC > 1:1070336/1‑48 CCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAG < 1:2529787/50‑1 TTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCG < 1:694767/50‑1 CGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCG < 1:1721795/50‑1 GCCAATCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGA < 1:1541803/50‑1 TCAGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCT > 1:803973/1‑50 AGAATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTT < 1:1763232/50‑1 ATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAA > 1:124438/1‑50 ATGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAA < 1:470454/50‑1 TGGCACTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAAT < 1:808404/50‑1 CTTCCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGT > 1:207479/1‑50 CCTGGCACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTG < 1:2434432/48‑1 ACCACGCCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACG > 1:313511/1‑50 CCGCCTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAG > 1:2531849/1‑50 CTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT > 1:997706/1‑50 TCCCCGCACCAGGGTTACCGCCAATCAGAATGGCACTTCCTGGCACCACGCCGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4626233‑4626179‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgccgccTAGTACGCGGTCGAACTCTTTAAATCCGGTGGAAAAACGCGGCAGCTCT < NC_000913/4626175‑4626127 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |