BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	1,154,362	C→T	A84V (GCC→GTC)	mltG →	endolytic murein transglycosylase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	1,154,362	0	C	T	100.0%	147.0 / NA	37	A84V (GCC→GTC)	mltG	endolytic murein transglycosylase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (14/23); total (14/23)

TTTTCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCT  >  NC_000913/1154315‑1154407

ttttCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCg                                             >  1:1417604/1‑50 (MQ=255)

   tCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCggg                                           <  1:953574/49‑1 (MQ=255)

     aaTGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGAc                                         <  1:890874/49‑1 (MQ=255)

      aTGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACtt                                       <  1:186983/50‑1 (MQ=255)

       tGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTa                                      <  1:213020/50‑1 (MQ=255)

        ggCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTAc                                     >  1:2508192/1‑50 (MQ=255)

         gctgctGCGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTAcc                                    <  1:2438678/50‑1 (MQ=255)

           tgctgcGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGc                                  >  1:2451224/1‑50 (MQ=255)

             ctgcGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCtt                                <  1:2304107/50‑1 (MQ=255)

                cGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCttt                               <  1:2767054/48‑1 (MQ=255)

                cGTATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCttt                               <  1:211474/48‑1 (MQ=255)

                  tATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTacac                           <  1:2755956/50‑1 (MQ=255)

                  tATCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTacac                           >  1:1031790/1‑50 (MQ=255)

                   aTCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACAcc                          >  1:2586782/1‑50 (MQ=255)

                   aTCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACAcc                          >  1:719110/1‑50 (MQ=255)

                    tCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACAcc                          <  1:887413/49‑1 (MQ=255)

                    tCGAACCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACAcc                          <  1:429074/49‑1 (MQ=255)

                       aaCCGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCg                         >  1:2420383/1‑47 (MQ=255)

                         ccGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGAt                    >  1:271286/1‑50 (MQ=255)

                         ccGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGAt                    <  1:2566958/50‑1 (MQ=255)

                          cGGATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGAt                    >  1:2633401/1‑49 (MQ=255)

                           ggATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGa                  >  1:1405622/1‑50 (MQ=255)

                            gATCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGAc                 <  1:1120385/50‑1 (MQ=255)

                             aTCTTTCTCACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGAcc                >  1:1696903/1‑50 (MQ=255)

                                  tctcACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGAcc                <  1:2509111/45‑1 (MQ=255)

                                  tctcACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGAcc                <  1:2509985/45‑1 (MQ=255)

                                  tctcACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGt              <  1:364399/47‑1 (MQ=255)

                                   ctcACTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTgcg           <  1:2137852/49‑1 (MQ=255)

                                      aCTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTgcgc          <  1:1075970/47‑1 (MQ=255)

                                      aCTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTgcgc          <  1:2553169/47‑1 (MQ=255)

                                      aCTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTgcgc          >  1:358760/1‑47 (MQ=255)

                                      aCTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGcgcg         <  1:1992734/48‑1 (MQ=255)

                                       cTTTAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCgaga      <  1:1205274/50‑1 (MQ=255)

                                        tttAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGAt     >  1:796198/1‑50 (MQ=255)

                                         ttAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATg    >  1:2332901/1‑50 (MQ=255)

                                          tAAAGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGAt     <  1:2288788/48‑1 (MQ=255)

                                            aaGTCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCt  <  1:1659326/49‑1 (MQ=255)

TTTTCAATGGCTGCTGCGTATCGAACCGGATCTTTCTCACTTTAAAGCCGGGACTTACCGCTTTACACCGCAGATGACCGTGCGCGAGATGCT  >  NC_000913/1154315‑1154407

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 39 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`