| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 675,552 | Δ7,819 bp | ybeQ–[hscC] | ybeQ, ybeR, djlB, ybeT, ybeU, djlC, [hscC] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 675552 | 683370 | 7819 | 27 [0] | [0] 28 | ybeQ–[hscC] | ybeQ,ybeR,djlB,ybeT,ybeU,djlC,[hscC] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 675551 | 0 (0.000) | 27 (0.890) | 24/98 | 0.1 | 100% | intergenic (+51/+19) | ybeL/ybeQ | DUF1451 domain‑containing protein YbeL/Sel1 repeat‑containing protein YbeQ |
| ? | NC_000913 | 683371 = | 0 (0.000) | coding (23/1671 nt) | hscC | chaperone protein HscC | |||||
GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCA > 1:1162631/1‑50 TCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAG < 1:2690980/49‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:751497/1‑50 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC < 1:326569/50‑1 GCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTC > 1:1799682/1‑50 GCAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCAT < 1:344428/50‑1 CAATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATT < 1:259605/50‑1 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA > 1:134879/1‑50 AATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTA < 1:2702916/50‑1 ATAAAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTAT < 1:968381/50‑1 AAGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCA < 1:1477248/50‑1 AGAGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCAT < 1:1655081/50‑1 AGAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTG < 1:573017/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:2116203/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:2607860/50‑1 GAATATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGC < 1:346601/50‑1 ATGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATT > 1:1999798/1‑49 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTA < 1:1125183/50‑1 TGGGCCGAATGAAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTT < 1:867260/49‑1 AAATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGA > 1:20991/1‑47 AATTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGA < 1:685738/50‑1 TTCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA < 1:70177/50‑1 TCCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:2088359/1‑49 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAA < 1:645058/49‑1 CCCATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAA > 1:1038903/1‑48 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA < 1:2160354/50‑1 CATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAA > 1:2481543/1‑48 GTCTGATTTCGCACAGCAATAAAGAGAATATGGGCCGAATGAAATTCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/675503‑675551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATGGCGAGTTCTGCATTATCCATTGCATTTATATCTTGAAAGAAAAAGA > NC_000913/683371‑683419 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |