Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,509,562 Δ46,201 bp [hicB]–maeA 43 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1509562 1555762 46201 35 [0] [0] 36 [hicB]–maeA [hicB],ydcR,ydcS,ydcT,ydcU,ydcV,patD,yncL,ortT,ydcY,ydcZ,mnaT,curA,mcbR,yncD,yncE,ansP,yncG,yncH,rhsE,ydcD,yncO,yncI,ydcC,pptA,yddH,nhoA,yddE,narV,narW,narY,narZ,narU,yddJ,yddK,yddL,yddG,fdnG,fdnH,fdnI,yddM,adhP,maeA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 15095610 (0.000)35 (1.150) 30/98 0.0 100% coding (54/417 nt) hicB antitoxin of the HicA‑HicB toxin‑antitoxin system
?NC_000913 1555763 = 0 (0.000)intergenic (‑94/+63) maeA/sra malate dehydrogenase, NAD‑requiring/30S ribosomal subunit protein S22

TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1509513‑1509561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  NC_000913/1555763‑1555811
                                                                                                  
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTA                                                  <  1:2303298/50‑1
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTA                                                  <  1:2183138/50‑1
    CCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAAC                                               >  1:1689371/1‑49
     CCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACA                                              <  1:639312/49‑1
       GTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAA                                            >  1:192991/1‑49
        TCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAA                                          <  1:2094585/50‑1
         CACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAA                                          >  1:937452/1‑49
          ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACA                                        >  1:1300211/1‑50
          ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAAC                                         <  1:730814/49‑1
          ACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAAC                                         <  1:1491172/49‑1
           CTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACAC                                       <  1:1062448/50‑1
             CTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAACCACCA                                     >  1:1527014/1‑50
                  ACCCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCG                                >  1:2155510/1‑50
                    CCGCGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCA                              <  1:759624/50‑1
                       CGCCGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGG                            >  1:2274736/1‑49
                          CGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAAT                        >  1:60497/1‑50
                          CGGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAAT                        <  1:33698/50‑1
                           GGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATG                       <  1:1140997/50‑1
                           GGAAGGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATG                       >  1:2230391/1‑50
                               GGCGGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGT                   <  1:150608/50‑1
                                  GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT                 >  1:429632/1‑49
                                  GGTTATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTT                 >  1:593931/1‑49
                                     TATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATC             >  1:1315462/1‑50
                                      ATATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCG            >  1:250510/1‑50
                                       TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT           >  1:510838/1‑50
                                       TATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCG            <  1:2700952/49‑1
                                        ATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT           >  1:1034824/1‑49
                                        ATGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGT           >  1:445598/1‑49
                                         TGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCA         <  1:2425489/50‑1
                                         TGGTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCA         >  1:1534907/1‑50
                                           GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT       <  1:684821/50‑1
                                           GTTTCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATT       >  1:159780/1‑50
                                              TCTAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAG    >  1:932514/1‑50
                                                TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  1:2569290/1‑50
                                                TAAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  1:2173893/1‑50
                                                                                                  
TTATCCCGTCACTCTTACACCCGCGCCGGAAGGCGGTTATATGGTTTCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1509513‑1509561
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑AAACAAAAACACCATTGCGCAGGCAATGGTGTTTAATCGTCATTGAGGA  >  NC_000913/1555763‑1555811

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.