| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,651,293 | Δ2,422 bp | [yhiS]–yhiS | [yhiS], insH‑11, yhiS | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3651293 | 3653714 | 2422 | 35 [0] | [0] 34 | [yhiS]–yhiS | [yhiS],insH‑11,yhiS |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3651292 | 0 (0.000) | 29 (1.000) | 28/94 | 0.0 | 100% | pseudogene (2/746 nt) | yhiS | putative uncharacterized protein YhiS |
| ? | NC_000913 | 3653715 = | 0 (0.000) | intergenic (+2/‑246) | yhiS/slp | putative uncharacterized protein YhiS/starvation lipoprotein | |||||
TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:110019/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:1928699/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT < 1:2407281/50‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:91833/49‑1TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTA < 1:1853782/49‑1 CAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATAT > 1:970730/1‑50 AAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTA > 1:1437612/1‑50 AACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT < 1:1938751/50‑1 ACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1792057/1‑49 CATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTAT > 1:1060664/1‑48 TTAGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCAC > 1:869194/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTT > 1:2316721/1‑50 AGCATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGC < 1:950680/46‑1 CATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTA < 1:2526698/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:2618326/50‑1 ATAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTAT < 1:815944/50‑1 TAAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATA < 1:1627047/50‑1 AAAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAA > 1:133086/1‑50 AAACAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAAT < 1:1563280/50‑1 CAAATGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCAT < 1:632847/50‑1 TGATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAA < 1:2113095/50‑1 ATGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAAT < 1:1916295/49‑1 TGAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA < 1:2261272/50‑1 GAATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAA > 1:428918/1‑49 AATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAA > 1:1179185/1‑49 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA < 1:1036617/50‑1 ATAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:2319015/1‑50 TAAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1874409/1‑49 AAGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAA > 1:1108549/1‑48 AGGAATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAG < 1:1260452/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT < 1:1641014/50‑1 AATTTTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATT > 1:1058004/1‑50 TTATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT > 1:1501456/1‑50 TATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTAT < 1:2236876/49‑1 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG > 1:134574/1‑49 ATATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATG < 1:1263809/49‑1 TATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA < 1:937110/50‑1 TCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3651243‑3651292‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atATTGATTATTAGCACTTTATAATCATTGAATAAAAATAGATTTTATGTA > NC_000913/3653715‑3653763 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |