| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,720,634 | Δ1,442 bp | IS150‑mediated | insJ–insK | insJ, insK |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3720634 | 3722075 | 1442 | 38 [0] | [0] 37 | insJ–insK | insJ,insK |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3720633 | 0 (0.000) | 37 (1.220) | 25/98 | 0.1 | 100% | noncoding (1/1443 nt) | IS150 | repeat region |
| ? | NC_000913 | 3722076 = | 0 (0.000) | intergenic (+27/+252) | insK/glyS | IS150 conserved protein InsB/glycine‑‑tRNA ligase subunit beta | |||||
ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722029‑3722123 | atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:2700254‑M2/48‑50 (MQ=255)atatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAAc > 1:414739‑M2/48‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtataa < 1:1508812‑M2/2‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:966256‑M2/4‑1 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt > 1:1867749‑M2/47‑50 (MQ=255) tatttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACt < 1:1299270‑M2/4‑1 (MQ=255) atttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt > 1:1615825‑M2/46‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACttt > 1:2010788‑M2/45‑50 (MQ=255) tttctgcgcattcccagcctcctgtgttgatttccaacgagtatAACtt < 1:397845‑M2/5‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:2200624‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTg < 1:2695457‑M2/7‑1 (MQ=255) tctgcgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGa > 1:342087‑M2/43‑50 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAttt < 1:2211026‑M2/11‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGAt < 1:698119‑M2/9‑1 (MQ=255) cgcattcccagcctcctgtgttgatttccaacgagtatAACTTTGATTta > 1:179839‑M2/39‑50 (MQ=255) gcattcccagcctcctgtattgatttccaacgagtatAACTTTGATTtat < 1:2284289‑M2/13‑1 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:962591‑M2/36‑50 (MQ=255) attcccagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAg > 1:1444915‑M2/36‑50 (MQ=255) cagcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAgg > 1:1190511‑M2/31‑50 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt > 1:1535691‑M2/30‑50 (MQ=255) agcctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGt < 1:53301‑M2/21‑1 (MQ=255) cctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTgg < 1:2189481‑M2/23‑1 (MQ=255) ctcctgtgttgatttccaacgagtatAACTTTGATTTATAGTCAGGTggg > 1:458475‑M2/27‑50 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:2600200‑M2/32‑1 (MQ=255) ttgatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtct < 1:1969014‑M2/32‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTtctc < 1:1173111‑M2/33‑1 (MQ=255) gatttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct > 1:41919‑M2/17‑50 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:1668527‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:44005‑M2/34‑1 (MQ=255) atttccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTctct < 1:448587‑M2/34‑1 (MQ=255) ccaacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCtctgtctg > 1:1366970‑M2/12‑50 (MQ=255) caacgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGc > 1:905850‑M2/11‑50 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:1799204‑M2/42‑1 (MQ=255) acgagtatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCt < 1:1377806‑M2/42‑1 (MQ=255) tatAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:2186465‑M2/4‑50 (MQ=255) tatAACTTTGATTTATAGCCAGGTGGGGCTTTTCTCTGTCTGCCTTTCgg > 1:112377‑M2/4‑50 (MQ=255) atAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGt > 1:1113623‑M2/3‑50 (MQ=255) | ACCTATATGCCTCGTGTTTAACTGTCCAACTTTTTGGGGTCAGTACAAACTTTGATTTATAGTCAGGTGGGGCTTTTCTCTGTCTGCCTTTCGGT > NC_000913/3722029‑3722123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |