| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 508,873 | Δ40,744 bp | copA–[ylbE] | 37 genes copA, copA, copA, glsA, ybaT, cueR, ybbJ, qmcA, fetA, fetB, cnoX, ybbO, tesA, ybbA, ybbP, rhsD, ybbC, ylbH, ybbD, ylbI, ylbG, selU, allS, allA, allR, gcl, hyi, glxR, ybbW, allB, ybbY, glxK, allE, allC, allD, fdrA, [ylbE] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 508873 | 549616 | 40744 | 27 [0] | [0] 27 | copA–[ylbE] | copA,copA,copA,glsA,ybaT,cueR,ybbJ,qmcA,fetA,fetB,cnoX,ybbO,tesA,ybbA,ybbP,rhsD,ybbC,ylbH,ybbD,ylbI,ylbG,selU,allS,allA,allR,gcl,hyi,glxR,ybbW,allB,ybbY,glxK,allE,allC,allD,fdrA,[ylbE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 508872 | 0 (0.000) | 27 (0.890) | 25/98 | 0.1 | 100% | intergenic (+313/+3) | ybaQ/copA | putative DNA‑binding transcriptional regulator YbaQ/Cu(+) exporting P‑type ATPase |
| ? | NC_000913 | 549617 = | 0 (0.000) | intergenic (+1/‑10) | ylbE/ylbF | DUF1116 domain‑containing protein YlbE/DUF2877 domain‑containing protein YlbF | |||||
GAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549572‑549665 | cgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc > 1:2270031‑M2/46‑50 (MQ=255)cgatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc > 1:157500‑M2/46‑50 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc < 1:997365‑M2/5‑1 (MQ=255) gatgccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAAc < 1:2429641‑M2/5‑1 (MQ=255) ccaaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCa < 1:379418‑M2/10‑1 (MQ=255) caaatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCaa < 1:1840012‑M2/11‑1 (MQ=255) aatgcgccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATg < 1:1783659‑M2/13‑1 (MQ=255) ccaccctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatc < 1:1569270‑M2/19‑1 (MQ=255) accctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcat < 1:2172124‑M2/21‑1 (MQ=255) cctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGatcatc > 1:1235300‑M2/28‑49 (MQ=255) ctaaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatcca > 1:1661416‑M2/27‑50 (MQ=255) taaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccat > 1:1245067‑M2/26‑50 (MQ=255) aaagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccatc > 1:1255009‑M2/25‑50 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATcatccat < 1:2675310‑M2/25‑1 (MQ=255) aagcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCatccatcc < 1:2621758‑M2/27‑1 (MQ=255) gcagcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCctc > 1:1719931‑M2/22‑50 (MQ=255) gcgcatccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGc < 1:2035675‑M2/32‑1 (MQ=255) tccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGcc < 1:387844‑M2/37‑1 (MQ=255) ccgcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGc > 1:1797184‑M2/13‑48 (MQ=255) gcaatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCag > 1:1015743‑M2/11‑49 (MQ=255) caatgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagta < 1:2630846‑M2/41‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtagt < 1:971036‑M2/43‑1 (MQ=255) atgatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCagtag > 1:242808‑M2/8‑49 (MQ=255) gatgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGtagtag > 1:1531257‑M2/6‑50 (MQ=255) tgtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg < 1:2109134‑M2/47‑1 (MQ=255) gtGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAgcg > 1:838483‑M2/3‑49 (MQ=255) tGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCa > 1:2503130‑M2/2‑50 (MQ=255) | GAACAGGCGCTGGAAGCACTGGCTGAAAGCATGGGTATTGGTTGAGGAACGCGCAATGACGATCATCCATCCTCTGCTTGCCAGTAGTAGCGCA > NC_000913/549572‑549665 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |