| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,697,216 | T→C | intergenic (‑164/+57) | uidR ← / ← hdhA | DNA‑binding transcriptional repressor UidR/7‑alpha‑hydroxysteroid dehydrogenase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,697,216 | 0 | T | C | 100.0% | 84.5 / NA | 24 | intergenic (‑164/+57) | uidR/hdhA | DNA‑binding transcriptional repressor UidR/7‑alpha‑hydroxysteroid dehydrogenase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (13/11); total (13/11) | |||||||||||
GTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTC > NC_000913/1697170‑1697262 | gTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCtgt > 1:1392943/1‑49 (MQ=255) aaCCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCtgatg < 1:2696737/49‑1 (MQ=255) aaCCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCtgat > 1:2384290/1‑48 (MQ=255) aCCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCtgatga < 1:438285/49‑1 (MQ=255) ccAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGt > 1:1230087/1‑50 (MQ=255) ccAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGt < 1:1128462/50‑1 (MQ=255) aTAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTa > 1:57140/1‑50 (MQ=255) tAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTAt < 1:2391159/50‑1 (MQ=255) tAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTAt > 1:1435071/1‑50 (MQ=255) gCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATc < 1:283365/49‑1 (MQ=255) ccGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATccc > 1:1383974/1‑50 (MQ=255) ccGTGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATccc < 1:987704/50‑1 (MQ=255) tGATTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCgg > 1:922971/1‑49 (MQ=255) aTTTGGCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTa < 1:2467260/49‑1 (MQ=255) gCTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAaacaa > 1:706187/1‑49 (MQ=255) cTGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAacaaca < 1:1694120/50‑1 (MQ=255) tGCCAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAacac > 1:2201885/1‑50 (MQ=255) ccAGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAacac < 1:2351612/48‑1 (MQ=255) aGTTATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAAcacgcac < 1:677008/50‑1 (MQ=255) ttATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAACACGCACgg > 1:2303131/1‑50 (MQ=255) tATTTAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAACACGCACGgt > 1:821412/1‑50 (MQ=255) tAGCAGAGACGCTGATGAGTTTATCCCGGTAAACAACACGCACGgttgtt > 1:153636/1‑50 (MQ=255) gagaCGCTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCg < 1:852054/50‑1 (MQ=255) aCGCTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTc > 1:2066219/1‑50 (MQ=255) | GTTAACCAATAGCCGTGATTTGGCTGCCAGTTATTTAGCAGAGACGTTGATGAGTTTATCCCGGTAAACAACACGCACGGTTGTTTACCGGTC > NC_000913/1697170‑1697262 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |