Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NC_000913 | 1,741,062 | T→C | C384C (TGT→TGC) | ydhC → | putative transporter YdhC |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 1,741,062 | 0 | T | C | 100.0% | 63.2 / NA | 18 | C384C (TGT→TGC) | ydhC | putative transporter YdhC |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (9/9); total (9/9) |
AACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCA > NC_000913/1741020‑1741106 | aaCAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCgaagaa < 1:1259608/49‑1 (MQ=255) agtagtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTg > 1:900002/1‑50 (MQ=255) agtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCt > 1:1249864/1‑50 (MQ=255) agtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCt > 1:364656/1‑50 (MQ=255) gtGCTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCt < 1:1503840/49‑1 (MQ=255) cTGGTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCa < 1:1686386/50‑1 (MQ=255) gTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAg < 1:1490988/48‑1 (MQ=255) gTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGaa > 1:130865/1‑50 (MQ=255) gTCGCGCTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGaa > 1:1090187/1‑50 (MQ=255) gcgcTGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATc < 1:694883/49‑1 (MQ=255) tGGGTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATgg > 1:2104716/1‑49 (MQ=255) gTTACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAAt < 1:2463100/50‑1 (MQ=255) ttACATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATg > 1:32727/1‑50 (MQ=255) aCATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGc < 1:2578710/49‑1 (MQ=255) cATGATGCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCg < 1:201362/50‑1 (MQ=255) gatgCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAg > 1:321532/1‑50 (MQ=255) tgCAACGTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTc < 1:216506/50‑1 (MQ=255) gTTGCGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCa > 1:822812/1‑49 (MQ=255) | AACAGTAGTGCTGGTCGCGCTGGGTTACATGATGCAACGTTGTGAAGAAGTTGGCTGCCAGAATCATGGCAATGCCGAAGTCGCTCA > NC_000913/1741020‑1741106 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |