| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 380,022 | (G)10→9 | intergenic (‑141/+47) | frmR ← / ← yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 380,013 | 0 | G | . | 100.0% | 57.8 / NA | 13 | intergenic (‑132/+56) | frmR/yaiO | DNA‑binding transcriptional repressor FrmR/outer membrane protein YaiO |
| Reads supporting (aligned to +/- strand): ref base G (0/0); new base . (9/4); total (9/4) | |||||||||||
GAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGG > NC_000913/379968‑380055 | gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg > 1:1044255/1‑50 (MQ=255)gaATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggg < 1:1853345/50‑1 (MQ=255) aaTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggg < 1:1032767/50‑1 (MQ=255) aTAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAggggggg > 1:564655/1‑50 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggc < 1:2256607/50‑2 (MQ=255) aaaTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggc > 1:2057932/1‑49 (MQ=255) aTTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAgggggggggct > 1:2096156/1‑47 (MQ=255) ggTGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAg > 1:483292/1‑50 (MQ=255) tGAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg < 1:1979259/50‑1 (MQ=255) gAATGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAggg > 1:274203/1‑49 (MQ=255) aaTGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGa < 1:1732212/49‑1 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAg > 1:954557/1‑50 (MQ=255) aTGTGGTCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAg < 1:1784368/50‑1 (MQ=255) tCGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGgccgcc < 1:8526/50‑1 (MQ=255) cGGAAAACAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGccc > 1:1199065/1‑50 (MQ=255) aaaCAAAGAGGAAA‑‑GGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:1012806/1‑49 (MQ=255) aCAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGa > 1:1990348/1‑48 (MQ=255) cAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:1293767/1‑50 (MQ=255) cAAAGAGGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAg > 1:880519/1‑50 (MQ=255) agagGAAA‑GGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAgcgg > 1:1142121/1‑50 (MQ=255) | GAATAAAATTTATCCGGTGAATGTGGTCGGAAAACAAAGAGGAAAGGGGGGGGGGCTAATCGGCAGGGAAGGCCGCCCCGGATAGCGG > NC_000913/379968‑380055 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |