| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 1,400,309 | Δ1 bp | coding (1465/1527 nt) | abgT ← | p‑aminobenzoyl glutamate:H(+) symporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,400,308 | 0 | A | . | 100.0% | 71.7 / NA | 16 | coding (1466/1527 nt) | abgT | p‑aminobenzoyl glutamate:H(+) symporter |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base . (7/9); total (7/9) | |||||||||||
GGTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCAAGA > NC_000913/1400261‑1400353 | ggTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCaca > 1:1880507/1‑48 (MQ=255)ggTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCac < 1:50624/49‑2 (MQ=255) acctATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACt < 1:1036789‑M1/49‑2 (MQ=255) acctATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACt < 1:557556‑M1/49‑2 (MQ=255) acctATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACt < 1:2303709‑M1/49‑2 (MQ=255) aCCTATCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATac > 1:2046341/1‑49 (MQ=38) aTCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg > 1:1991921‑M1/1‑45 (MQ=255) tCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg < 1:1169553‑M1/48‑5 (MQ=255) tCGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg < 1:2248131‑M1/48‑5 (MQ=255) cGGCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatg > 1:894659‑M1/1‑43 (MQ=255) ggCAGACCGACAAGATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcag > 1:766108‑M1/1‑42 (MQ=255) aGATACCACGCCAGC‑ACGTC‑GCAGCCATACtatgcagaaacaatgctgtc < 1:2025903‑M1/50‑21 (MQ=255) gATACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcg < 1:1935905‑M1/50‑22 (MQ=255) aTACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcga > 1:2312800‑M1/1‑28 (MQ=255) aTACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcga < 1:338318‑M1/50‑23 (MQ=255) tACCACGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgat < 1:210016‑M1/50‑24 (MQ=255) aCGCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatggct > 1:1733784‑M1/1‑23 (MQ=255) gCCAGC‑ACATC‑GCAGCCATACtatgcagaaacaatgctgtcgatggctgc > 1:1195258‑M1/1‑21 (MQ=255) | GGTAAATACCCGGACCTATCGGCAGACCGACAAGATACCACGCCAGCAACATCAGCAGCCATACCACCAAAAAGATAAGTGGATAGGGCAAGA > NC_000913/1400261‑1400353 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |